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Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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50513 | Chemical Shifts: 1 set |
Backbone chemical shift assignments for the Betacoronavirus SARS-CoV-2 non-structural protein Nsp9 |
Backbone chemical shift assignments for the SARS-CoV-2 non-structural protein Nsp9: intermediate (ms - us) dynamics in the C-terminal helix at the dimer interface.
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Garry W Buchko, Justin C Craig, Mowei Zhou, Peter J Myler, Wesley C Van Voorhis |
30660 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
Solution NMR structure of the nodule-specific cysteine-rich peptide NCR044 from Medicago truncatula |
Antifungal symbiotic peptide NCR044 exhibits unique structure and multifaceted mechanisms of action that confer plant protection
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Dilip M Shah, Garry W Buchko, Hui Li, Jared B Shaw, Kirk J Czymmek, Siva Velivelli |
27420 | Chemical Shifts: 1 set |
Chemical shifts for the de novo mini protein gHH_44 in the reduced state. |
Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide-rich de novo designed peptides
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Christopher D Bahl, David Baker, Elizabeth A Shaw, Garry W Buchko, Martin Karplus, Peter J Myler, Stephen A Rettie, Surya Pulavarti, Thomas Szyperski, Victor Ovchinnikov |
27415 | Chemical Shifts: 1 set |
Chemical shift assignments for TRAP, a MMP20 proteolysis product of murine amelogenin. |
Identification of major matrix metalloproteinase-20 proteolytic processing products of murine amelogenin and tyrosine-rich amelogenin peptide using a nuclear magnetic resonance spectroscopy based method
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Barbara J Tarasevich, Garry W Buchko, Jinhui Tao, Rajith Jayasinha Arachchige, Wendy J Shaw |
27269 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for gHEEE_02 in presence of 10 mM TCEP |
Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide-rich de novo designed peptides
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Christopher D Bahl, David Baker, Elizabeth A Shaw, Garry W Buchko, Martin Karplus, Peter J Myler, Stephen A Rettie, Surya Pulavarti, Thomas Szyperski, Victor Ovchinnikov |
30312 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
Solution structure of the de novo mini protein gHEEE_02 |
Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide-rich de novo designed peptides
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Christopher D Bahl, David Baker, Elizabeth A Shaw, Garry W Buchko, Martin Karplus, Peter J Myler, Stephen A Rettie, Surya Pulavarti, Thomas Szyperski, Victor Ovchinnikov |
30231 | Chemical Shifts: 1 set |
Solution structure of the oxidized iron-sulfur protein adrenodoxin from Encephalitozoon cuniculi. Seattle Structural Genomics Center for Infectious Disease target EncuA.00705.a |
Solution structure of the oxidized iron-sulfur protein andrenodoxin from Encephalitozoon cuniculi.
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Garry W Buchko, Joseph A Laureanti, Kayleigh F Barrett, Peter J Myler, Samuel Arnold, Sandhya Subramanian, Shareef Shaheen, Wesley C Van Voorhis |
30204 | Chemical Shifts: 1 set Spectral_peak_list: 2 sets |
Solution structure of the de novo mini protein gHH_44 |
Accurate de novo design of hyperstable constrained peptides
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Alexander Eletsky, Andrew Watkins, Christopher D Bahl, Colin E Correnti, David Baker, David J Craik, Evangelos Coutsias, Gabriel J Rocklin, Garry W Buchko, Gaurav Bhardwaj, James M Olson, Jason M Gilmore, Lauren P Carter, Olivier Cheneval, Per Jr J Greisen, Peta J Harvey, Po-Ssu S Huang, Quentin Kaas, Richard Bonneau, Stephen A Rettie, Surya V Pulavarti, Thomas Szyperski, Thomas W Linsky, Vikram Khipple K Mulligan, William A Johnsen, Xianzhong Xu, Yifan Song |
26858 | Chemical Shifts: 1 set |
Backbone chemical shift assignments for the U1 protein from the Bas-Congo virus. Seattle Structural Genomic Center for Infectious Disease target RhbaA.18619.a.D16. |
Backbone chemical shift assignments and secondary structure analysis of the U1 protein from the Bas-Congo virus
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Ellen G Wallace, Garry W Buchko, Kateri A Atkins, Matthew C Clifton, Peter J Myler |
25763 | Chemical Shifts: 1 set |
Solution structure of an MbtH-like protein from Mycobacterium avium, Seattle Structural Genomics Center for Infectious Disease target MyavA.01649.c |
Solution structure of a MbtH-like protein from Mycobacterium avium.
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Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
25566 | Chemical Shifts: 1 set |
Backbone chemical shift assignments for oxidized peroxiredoxin Q from the plant pathogen Xanthomonas campestris |
Backbone chemical shift assignments for Xanthomonas campestris peroxiredoxin Q in the reduced and oxidized states: a dramatic change in backbone dynamics
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Arden Perkins, Derek Parsonage, Garry W Buchko, Leslie B Poole, P Andrew Karplus |
25557 | Chemical Shifts: 1 set |
Backbone chemical shift assignments for reduced peroxiredoxin Q from the plant pathogen Xanthomonas campestris. |
Backbone chemical shift assignments for Xanthomonas campestris peroxiredoxin Q in the reduced and oxidized states: a dramatic change in backbone dynamics
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Arden Perkins, Derek Parsonage, Garry W Buchko, Leslie B Poole, P Andrew Karplus |
25464 | Chemical Shifts: 1 set |
Solution structure of an MbtH-like protein from Mycobacterium marinum. Seattle Structural Genomics Center for Infectious Disease target MymaA.01649.c |
Structural characterization of a beta-hydroxyacid dehydrogenase from Geobacter sulfurreducens and Geobacter metallireducens with succinic semialdehyde reductase activity
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Garry W Buchko, Ling Qin, R Michael Garavito, Shihua Wang, Yanfeng Zhang, Yi Zheng |
25278 | Chemical Shifts: 1 set |
Backbone chemical shift assignments for the sensor domain of the Burkholderia pseudomallei histidine kinase RisS. Seattle Structural Genomics Center for Infectious Disease target BupsA.00863.i. |
Backbone chemical shift assignments for the sensor domain of the Burkholderia pseudomallei histidine kinase RisS - An "invisible" dimer interface.
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Garry W Buchko, Isabelle Phan, Peter J Myler, Samuel I Miller, Stephen N Hewitt, Thomas E Edwards, Wesley C Van Voorhis |
25195 | Chemical Shifts: 1 set |
Solution structure of a putative arsenate reductase from Brucella melitensis. Seattle Structural Genomics Center for Infectious Disease target BrabA.00073.a |
Solution NMR structure of an arsenate reductase from Brucella melitensis.
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Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
19938 | Chemical Shifts: 1 set |
Solution NMR structure of a putative thioredoxin (ECH_0218) in the oxidized state from Ehrlichia chaffeensis, the etiological agent responsible for human monocytic ehrlichiosis. Seattle Structural Genomics Center for Infectious Disease target EhchA.00546.a |
Solution structure of the Ehrlichia chaffeensis thioredoxin ECH_0218 in the reduced and oxidized states: disorder around the CXXC active site
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Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
19452 | Chemical Shifts: 1 set |
Solution NMR structure of a putative thioredoxin (ECH_0218) in the reduced state from Ehrlichia chaffeensis, the etiological agent responsible for human monocytic ehrlichiosis. Seattle Structural Genomics Center for Infectious Disease target EhchA.00546.a |
Solution structure of the Ehrlichia chaffeensis thioredoxin ECH_0218 in the reduced state: disorder around the CXXC active site.
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Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
18812 | Chemical Shifts: 1 set |
Solution structure of a DUF3349 annotated protein from Mycobacterium abscessus, MAB_3403c. Seattle Structural Genomics Center for Infectious Disease target Myab.17112.a |
Evidence for further structural diversity in the DUF3349 family
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Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
18673 | Chemical Shifts: 1 set |
Solution NMR structure of a potential acylphosphatase from Giardia lamblia, Seattle Structural Genomics Center for Infectious Disease target GilaA.01396.a |
Solution structure of an acylphosphatase from Giardia lamblia, the etiological agent responsible for giardiasis
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
18345 | Chemical Shifts: 1 set |
Solution structure of the anti-fungal defensin DEF4 (MTR_8g070770) from Medicago truncatula (barrel clover) |
Structure-function analysis of the plant defensin DEF4 from Medicago truncatula (barrel clover)
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Dilip M Shah, Garry W Buchko, Thomas J Smith |
18255 | Chemical Shifts: 1 set |
Solution structure of a MbtH-like protein from Burkholderia pseudomallei, the etiological agent responsible for melioidosis. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target BupsA.13472.b. |
Solution structure of a MbtH-like protein from Burkholderia pseudomallei, the etiological agent responsible for melioidosis
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
18016 | Chemical Shifts: 1 set |
Solution structure of MSMEG_1053, the second DUF3349 annotated protein in the genome of Mycobacterium smegmatis. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target MysmA.17112.b |
Different structures for two DUF3349 annotated proteins in the genome of Mycobacterium smegmatis suggest a structural diversity within the DUF3349 superfamily.
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Alberto J Napuli, Chang-Yub Kim, Garry W Buchko, Isabelle Phan, Jan Abendroth, Peter J Myler, Stephen N Hewitt, Thomas E Edwards, Wesley C Van Voorhis |
17818 | Chemical Shifts: 1 set |
Solution NMR structure of a FKBP-type peptidyl-prolyl cis-trans isomerase from Giardia lamblia. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target GilaA.00840.a |
Solution structure of a putative FKBP-type peptidyl-propyl cis-trans isomerase from Giardia lamblia.
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Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
17597 | Chemical Shifts: 1 set |
Chemical shift assignments for Rv0577, a putative glyoxylase associated with virulence from Mycobacterium tuberculosis. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target MytuD.17269.a. |
Chemical shift assignments for Rv0577, a putative glyoxylase associated with virulence from Mycobacterium tuberculosis.
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Chang-Yub Kim, Garry W Buchko, Heungbok Kim, Peter J Myler, Thomas C Terwilliger |
17235 | Chemical Shifts: 1 set |
Solution structure of a putative acyl carrier protein from Anaplasma phagocytophilum. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target AnphA.01018.a |
Solution structure of a putative acyl carrier protein from Anaplasma phagocytophilum, the bacterium responsible for human granulocytic ehrlichiosis.
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
16995 | Chemical Shifts: 1 set |
Solution structure of a bolA protein (ECH_0303) from Ehrlichia chaffeensis, the causative agent of human monocytic ehrlichiosis. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target EhchA.10365.a |
Structural characterization of a BolA protein (ECH_0303) from Ehrlichia chaffeensis, the agent responsible for human monocytotropic ehrlichiosis.
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
16774 | Chemical Shifts: 1 set |
Solution structure of the Mycobacterium tuberculosis protein Rv0543c, a member of the DUF3349 superfamily. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target MytuD.17112.a |
Inaugural structure from the DUF3349 superfamily of proteins, Mycobacterium tuberculosis Rv0543c.
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Chang-Yub Kim, Garry W Buchko, Isabelle Phan, Peter J Myler, Thomas C Terwilliger |
16517 | Chemical Shifts: 1 set |
Solution structure of an arsenate reductase (ArsC) related protein from Brucella melitensis. Seattle Structural Genomics Center for Infectious Disease (SSGCID) target BrabA.00007.a. |
Solution structure of an arsenate reductase-related protein, YffB, from Brucella melitensis, the etiological agent responsible for brucellosis.
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
16473 | Chemical Shifts: 1 set |
Solution structure of zinc-substituted rubredoxin B (Rv3250c) from Mycobacterium tuberculosis. Seattle Structural Genomics Center for Infectious Disease(SSGCID)target MytuD.01635a |
Solution structure of zinc-associated rubredoxin B (Rv3250c) from Mycobacterium tuberculosis.
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephan N Hewitt, Wesley C Van Voorhis |
16253 | Chemical Shifts: 1 set |
NMR chemical shift assignments for Rv2377c, a MbtH-like protein from Mycobacterium tuberculosis: A Structural Genomics Center for Infectious Disease (SSGCID) community request |
Solution structure of Rv2377c-founding member of the MbtH-like protein family.
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Chang-Yub Kim, Garry W Buchko, Peter J Myler, Thomas C Terwilliger |
16144 | Chemical Shifts: 1 set |
Backbone and side chain 1H, 13C, and 15N NMR assignments for the organic hydroperoxide resistance protein (Ohr) from Burkholderia pseudomallei, Seattle Structural Genomics Center for Infectious Disease (SSGCID) target BupsA.00074 |
Backbone and side chain (1)H, (13)C, and (15)N NMR assignments for the organic hydroperoxide resistance protein (Ohr) from Burkholderia pseudomallei.
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Alberto J Napuli, Garry W Buchko, Peter J Myler, Stephen N Hewitt, Wesley C Van Voorhis |
16118 | Chemical Shifts: 1 set |
Solution structure of PFE0790c, a putative bolA-like protein from the protozoan parasite Plasmodium falciparum: A Structural Genomics Center for Infectious Disease (SSGCID) community request. |
Structural characterization of PFE0790c, a putative bolA-like protein from Plasmodium falciparum, the protozoan parasite responsible for malaria.
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Adelinda Yee, Anthony Semesi, Cheryl H Arrowsmith, Garry W Buchko, Raymond Hui |
15662 | Chemical Shifts: 1 set |
1H, 13C, and 15N resonance assignments of murine amelogenin, an essential enamel biomineralization protein. |
1H, 13C, and 15N resonance assignments of murine amelogenin, an essential enamel biomineralization protein
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Garry W Buchko, Jacky Bekhazi, John R Cort, Malcolm L Snead, Nancy B Valentine, Wendy J Shaw |
15539 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N NMR assignments for the Cyanothece 51142 protein A1KYE3 - a protein in the DUF683 family associated with nitrogen fixation. |
Backbone 1H, 13C, and 15N NMR assignments for the Cyanothece 51142 protein cce_0567: a protein associated with nitrogen fixation in the DUF683 family
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Garry W Buchko, Heidi J Sofia |
7279 | Chemical Shifts: 1 set |
NMR resonance assignments of the human non-chromitin architectural transcription factor HMGA1 |
NMR resonance assignments of the human high mobility group protein HMGA1.
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Garry W Buchko, Michael A Kennedy, Natacha M Lourette, Raymond Reeves, Shuisong Ni |
7000 | Chemical Shifts: 1 set |
Solution structure of the conserved hypothetical protein Rv2302 from the bacterium Mycobacterium tuberculosis |
Solution structure of the conserved hypothetical protein Rv2302 from the bacterium Mycobacterium tuberculosis
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Chang Y Kim, Garry W Buchko, Michael A Kennedy, Thomas C Terwilliger |
5570 | Chemical Shifts: 1 set |
1H, 13C, and 15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans |
Letter to the Editor: 1H, 13C, and 15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans
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Garry W Buchko, Michael A Kennedy, Shusoing Ni, Stephen R Holbrook |
5219 | Chemical Shifts: 1 set |
Base excision repair: NMR backbone assignments of Escherichia coli formamidopyrimidine-DNA glycosylase |
Letter to the Editor: Base excision repair: NMR backbone assignments of Escherichia coli formamidopyrimidine-DNA glycosylase
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Garry W Buchko, Michael A Kennedy, Susan S Wallace |