Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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51702 | Chemical Shifts: 1 set |
BlaC D179N | Asp179 in the class A beta-lactamase from Mycobacterium tuberculosis is a conserved yet not essential residue due to epistasis | Aleksandra Chikunova, Amber A de Block, Danny B van Zanten, Ilona van Alen, Marcellus Ubbink, Monika Timmer, Steffen Brunle |
50564 | Chemical Shifts: 1 set |
Mutation G269S enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam | The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam | Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad |
50566 | Chemical Shifts: 1 set |
Mutation D172N enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam | The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam | Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad |
50563 | Chemical Shifts: 1 set |
Mutation G132S enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam | The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam | Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad |
50565 | Chemical Shifts: 1 set |
Mutation A55E enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam | The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam | Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad |
28112 | Chemical Shifts: 1 set |
1H, 13C, and 15N chemical shift assignments of the Gp4 from the Pseudomonas phage LUZ24 | Novel anti-repression mechanism of H-NS proteins by a phage protein | Aimee L Boyle, Alexander N Volkov, Amanda M Erkelens, Andrew M Lippa, Fredj Ben B Bdira, Liang Qin, Marcellus Ubbink, Nicholas Bowring, Remus T Dame, Simon L Dove |
27929 | Chemical Shifts: 1 set Heteronuclear NOE Values: 1 set T1 Relaxation Values: 1 set T2 Relaxation Values: 2 sets Order Parameters: 1 set |
BlaC bound to avibactam | Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding | Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings |
27890 | Chemical Shifts: 1 set Heteronuclear NOE Values: 1 set T1 Relaxation Values: 1 set T2 Relaxation Values: 2 sets Order Parameters: 1 set |
BlaC in bound to clavulanic acid | Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding | Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings |
27888 | Chemical Shifts: 1 set Heteronuclear NOE Values: 2 sets T1 Relaxation Values: 2 sets T2 Relaxation Values: 4 sets Order Parameters: 1 set |
BlaC in free form | Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding | Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings |
27067 | Chemical Shifts: 1 set |
BlaC | Phosphate promotes the recovery of Mycobacterium tuberculosis \u03b2-lactamase from clavulanic acid inhibition | Anneloes J Blok, Bogdan I Florea, Josef P Kynast, Lin Dai, Marcellus Ubbink, Monika Timmer, Navraj S Pannu, Raffaella Tassoni, Steven A van der Schoot, Wendy Luu, Wouter Elings |
19884 | Chemical Shifts: 1 set |
Yeast cytochrome c peroxidase assignment | The cytochrome c peroxidase and cytochrome c encounter complex: The other side of the story. | Frank Lohr, Harald Schwalbe, Jesika Schilder, Marcellus Ubbink |
19763 | Chemical Shifts: 1 set |
The delicate conformational balance of a redox enzyme: Cytochrome P450cam does not open but remains closed when its partner putidaredoxin binds. | Delicate conformational balance of the redox enzyme cytochrome P450cam | Anneloes Blok, Marcellus Ubbink, Mathias AS Hass, Monika Timmer, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma |
19740 | Chemical Shifts: 1 set |
The delicate conformational balance of a redox enzyme: Cytochrome P450cam does not open but remains closed when its partner putidaredoxin binds. | Delicate conformational balance of the redox enzyme cytochrome P450cam | Anneloes Blok, Marcellus Ubbink, Mathias AS Hass, Monika Timmer, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma |
19247 | Chemical Shifts: 2 sets |
Backbone (1H,15N, CA, CB) assignments of Populus nigra Plastocyanin (Zn) | Dynamics between plastocyanin and tetralysine peptides | Anneloes Blok, Jan Wouter Drijfhout, Jia-Ying Guan, Johannes Foester, Marcellus Ubbink, Matthias Ullmann, Monika Timmer |
19236 | Chemical Shifts: 1 set |
Backbone (1H, 15N, CA, CB) assignments of D. crassirhizoma Plastocyanin (Zn) | Dynamics in the complex of plastocyanin and tetralysine peptides | Anneloes Blok, G Matthias Ullmann, Jan Wouter Drijfhout, Jia-Ying Guan, Johannes Foester, Marcellus Ubbink, Monika Timmer |
19038 | Chemical Shifts: 1 set |
The structure of the complex of cytochrome P450cam and its electron donor putidaredoxin determined by paramagnetic NMR spectroscopy | The structure of the cytochrome p450cam-putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography. | Alexander Kloosterman, Anneloes Blok, Betul Olmez, Frank Lohr, Harald Schwalbe, Hiroyasu Koteishi, Marcellus Ubbink, Masaki Nojiri, Mathias AS Hass, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma, Yuki Kikui |
18828 | Chemical Shifts: 1 set |
NMR Assignment of Arabidopsis thaliana cytochrome c in its reduced state | Communication between (L)-galactono-1,4-lactone dehydrogenase and cytochrome c. | Adrie H Westphal, Blas Moreno-Beltran, Irene Diaz-Moreno, Jose A Navarro, Manuel Hervas, Marcellus Ubbink, Miguel A de la Rosa, Milagros Medina, Nicole GH Leferink, Patricia Ferreira, Qamar Bashir, Willem JH van Berkel |
17118 | Chemical Rates: 1 set |
Conformation of Pseudoazurin in the 152 kDa Electron Transfer Complex with Nitrite Reductase Determined by Paramagnetic NMR | Conformation of Pseudoazurin in the 152 kDa Electron Transfer Complex with Nitrite Reductase Determined by Paramagnetic NMR | Marcellus Ubbink, Miguel Prudencio, Monica D Vlasie, Ruben Fernandez-Busnadiego |
17053 | Binding_constants: 1 set |
A NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6 | An NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6 | Antonio Diaz-Quintana, Irene Diaz-Moreno, Marcellus Ubbink, Miguel A De la Rosa |
16740 | Chemical Shifts: 1 set |
Amide assignments for Paracoccus denitrificans amicyanin-ZnII. | Amicyanin Transfers Electrons from Methylamine Dehydrogenase to Cytochrome c-551i via a Ping-Pong Mechanism, not a Ternary Complex. | Angelo Merli, Anneloes Blok, Bernd Ludwig, Chiara Cavalieri, Francesca Meschi, Frank Wiertz, Gian Luigi Rossi, Hendrik A Heering, Linda Klauss, Marcellus Ubbink |
16741 | Chemical Shifts: 1 set |
Backbone assignments for Paracoccus denitrificans amicyanin-CuI. | Amicyanin Transfers Electrons from Methylamine Dehydrogenase to Cytochrome c-551i via a Ping-Pong Mechanism, not a Ternary Complex. | Angelo Merli, Anneloes Blok, Bernd Ludwig, Chiara Cavalieri, Francesca Meschi, Frank Wiertz, Gian Luigi Rossi, Hendrik A Heering, Linda Klauss, Marcellus Ubbink |
7434 | Chemical Shifts: 1 set |
Backbone assignment of 3F5 heavy chain antibody fragment in its free form and in complex with PABPN1 | Structural insight into the recognition of PABPN1 by the flexible loops of a heavy chain antibody fragment | Antonietta Impagliazzo, Armand Tepper, Marcellus Ubbink, Silvere M van der Maarel, Theo C Verrips |
16586 | Chemical Shifts: 1 set |
Backbone assignment of 3F5 heavy chain antibody fragment in its free form | Structural basis for a PABPN1 aggregation-preventing antibody fragment in OPMD. | Antonietta Impagliazzo, Armand W Tepper, Marcellus Ubbink, Silvere M van der Maarel, Theo C Verrips |
16024 | Chemical Shifts: 1 set |
NMR structrure of gallium subsituted ferredoxin | Structural and functional characterization of the ga-substituted ferredoxin from Synechocystis sp. PCC6803, a mimic of the native protein. | David B Knaff, Jung-Sung Chung, Marcellus Ubbink, Masakazu Hirasawa, Sandra Scanu, Xingfu Xu |
15917 | Chemical Shifts: 2 sets |
TEM-1 BETA-LACTAMASE VARIANT ALLOSTERICALLY REGULATED BY KANAMYCIN | Engineering an allosteric binding site for aminoglycosides into TEM1-beta-Lactamase | Alexander N Volkov, Christine Evrard, Humberto Barrios, Jacques Fastrez, Jean-Paul Declercq, Marcellus Ubbink, Pascale Mathonet, Patrice Soumillion |
15301 | Chemical Shifts: 2 sets |
Solution model of crosslinked complex of cytochrome c and adrenodoxin | Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy | Dmitri I Svergun, Frank Hannemann, Marcellus Ubbink, Peter V Konarev, Rita Bernhardt, Wolfgang Reinle, Xingfu Xu |
7390 | Chemical Shifts: 2 sets |
Solution model of crosslinked complex of cytochrome c and adrenodoxin | Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy | Dmitri I Svergun, Frank Hannemann, Marcellus Ubbink, Peter V Konarev, Rita Bernhardt, Wolfgang Reinle, Xingfu Xu |
7370 | Chemical Shifts: 1 set |
Backbone 1H and 15N chemical shift assignments of D. crassirhizoma Plastocyanin | Protonation of a histidine copper ligand in fern plastocyanin | Annabelle Mery, Antonio Ranieri, Ellen A Thomassen, Marcellus Ubbink, Marco Sola, Martin Ph Verbeet, Rinske Hulsker, Takamitsu Kohzuma |
6113 | Chemical Shifts: 1 set |
1H, 13C and 15N assignment of the second PDZ domain of the neuronal adaptor protein X11alpha | Solution Structure of the Second PDZ Domain of the Neuronal Adaptor X11alpha and its Interaction with the C-terminal Peptide of the Human Copper Chaperone for Superoxide Dismutase | Aude E Duquesne, Chris A Spronk, Geerten W Vuister, Gerard W Canters, Jaap Brouwer, Jan W Drijfhout, Marcellus Ubbink, Martina de Ruijter, Sander B Nabuurs |
6043 | Chemical Shifts: 1 set |
1H, 13C and 15N resonance assignment of Cu(I)-Pseudoazurin from Alcaligenes faecalis S-6 | Letter to the Editor: 1H, 13C and 15N resonance assignment of Cu(I)-Pseudoazurin from Alcaligenes faecalis S-6 | Antonietta Impagliazzo, Marcellus Ubbink |
4465 | Chemical Shifts: 1 set |
The Structural role of the Copper-coordinating and Surface-exposed Histidine Residue in the Blue Copper Protein Azurin | The Structural role of the Copper-coordinating and Surface-exposed Histidine Residue in the Blue Copper Protein Azurin | Gerard W Canters, Johannes H Bitter, Lars JC Jeuken, Marcellus Ubbink, Pieter van Vliet, W Meyer-Klaucke |