BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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Entry ID Data summary Entry Title Citation Title Authors
51702 Chemical Shifts: 1 set
BlaC D179N Asp179 in the class A beta-lactamase from Mycobacterium tuberculosis is a conserved yet not essential residue due to epistasis Download bibtex for citation iamge Aleksandra Chikunova, Amber A de Block, Danny B van Zanten, Ilona van Alen, Marcellus Ubbink, Monika Timmer, Steffen Brunle
50564 Chemical Shifts: 1 set
Mutation G269S enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam Download bibtex for citation iamge Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad
50566 Chemical Shifts: 1 set
Mutation D172N enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam Download bibtex for citation iamge Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad
50563 Chemical Shifts: 1 set
Mutation G132S enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam Download bibtex for citation iamge Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad
50565 Chemical Shifts: 1 set
Mutation A55E enhances resistance of Mycobacterium tuberculosis b-lactamase against sulbactam The G132S mutation enhances the resistance of Mycobacterium tuberculosis beta-lactamase against sulbactam Download bibtex for citation iamge Adil Safeer, Aleksandra Chikunova, Anastassis Perrakis, Ilona van Alen, Marcellus Ubbink, Misbha Ud Din Ahmad
28112 Chemical Shifts: 1 set
1H, 13C, and 15N chemical shift assignments of the Gp4 from the Pseudomonas phage LUZ24 Novel anti-repression mechanism of H-NS proteins by a phage protein Download bibtex for citation iamge Aimee L Boyle, Alexander N Volkov, Amanda M Erkelens, Andrew M Lippa, Fredj Ben B Bdira, Liang Qin, Marcellus Ubbink, Nicholas Bowring, Remus T Dame, Simon L Dove
27929 Chemical Shifts: 1 set
Heteronuclear NOE Values: 1 set
T1 Relaxation Values: 1 set
T2 Relaxation Values: 2 sets
Order Parameters: 1 set
BlaC bound to avibactam Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding Download bibtex for citation iamge Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings
27890 Chemical Shifts: 1 set
Heteronuclear NOE Values: 1 set
T1 Relaxation Values: 1 set
T2 Relaxation Values: 2 sets
Order Parameters: 1 set
BlaC in bound to clavulanic acid Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding Download bibtex for citation iamge Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings
27888 Chemical Shifts: 1 set
Heteronuclear NOE Values: 2 sets
T1 Relaxation Values: 2 sets
T2 Relaxation Values: 4 sets
Order Parameters: 1 set
BlaC in free form Beta-Lactamase of Mycobacterium tuberculosis Shows Dynamics in the Active Site That Increase upon Inhibitor Binding Download bibtex for citation iamge Anamika Gaur, Anneloes J Blok, Hugo van Ingen, Marcellus Ubbink, Monika Timmer, Wouter Elings
27067 Chemical Shifts: 1 set
BlaC Phosphate promotes the recovery of Mycobacterium tuberculosis \u03b2-lactamase from clavulanic acid inhibition Download bibtex for citation iamge Anneloes J Blok, Bogdan I Florea, Josef P Kynast, Lin Dai, Marcellus Ubbink, Monika Timmer, Navraj S Pannu, Raffaella Tassoni, Steven A van der Schoot, Wendy Luu, Wouter Elings
19884 Chemical Shifts: 1 set
Yeast cytochrome c peroxidase assignment The cytochrome c peroxidase and cytochrome c encounter complex: The other side of the story. Download bibtex for citation iamge Frank Lohr, Harald Schwalbe, Jesika Schilder, Marcellus Ubbink
19763 Chemical Shifts: 1 set
The delicate conformational balance of a redox enzyme: Cytochrome P450cam does not open but remains closed when its partner putidaredoxin binds. Delicate conformational balance of the redox enzyme cytochrome P450cam Download bibtex for citation iamge Anneloes Blok, Marcellus Ubbink, Mathias AS Hass, Monika Timmer, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma
19740 Chemical Shifts: 1 set
The delicate conformational balance of a redox enzyme: Cytochrome P450cam does not open but remains closed when its partner putidaredoxin binds. Delicate conformational balance of the redox enzyme cytochrome P450cam Download bibtex for citation iamge Anneloes Blok, Marcellus Ubbink, Mathias AS Hass, Monika Timmer, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma
19247 Chemical Shifts: 2 sets
Backbone (1H,15N, CA, CB) assignments of Populus nigra Plastocyanin (Zn) Dynamics between plastocyanin and tetralysine peptides Download bibtex for citation iamge Anneloes Blok, Jan Wouter Drijfhout, Jia-Ying Guan, Johannes Foester, Marcellus Ubbink, Matthias Ullmann, Monika Timmer
19236 Chemical Shifts: 1 set
Backbone (1H, 15N, CA, CB) assignments of D. crassirhizoma Plastocyanin (Zn) Dynamics in the complex of plastocyanin and tetralysine peptides Download bibtex for citation iamge Anneloes Blok, G Matthias Ullmann, Jan Wouter Drijfhout, Jia-Ying Guan, Johannes Foester, Marcellus Ubbink, Monika Timmer
19038 Chemical Shifts: 1 set
The structure of the complex of cytochrome P450cam and its electron donor putidaredoxin determined by paramagnetic NMR spectroscopy The structure of the cytochrome p450cam-putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography. Download bibtex for citation iamge Alexander Kloosterman, Anneloes Blok, Betul Olmez, Frank Lohr, Harald Schwalbe, Hiroyasu Koteishi, Marcellus Ubbink, Masaki Nojiri, Mathias AS Hass, Simon P Skinner, Wei-Min Liu, Yoshitaka Hiruma, Yuki Kikui
18828 Chemical Shifts: 1 set
NMR Assignment of Arabidopsis thaliana cytochrome c in its reduced state Communication between (L)-galactono-1,4-lactone dehydrogenase and cytochrome c. Download bibtex for citation iamge Adrie H Westphal, Blas Moreno-Beltran, Irene Diaz-Moreno, Jose A Navarro, Manuel Hervas, Marcellus Ubbink, Miguel A de la Rosa, Milagros Medina, Nicole GH Leferink, Patricia Ferreira, Qamar Bashir, Willem JH van Berkel
17118 Chemical Rates: 1 set
Conformation of Pseudoazurin in the 152 kDa Electron Transfer Complex with Nitrite Reductase Determined by Paramagnetic NMR Conformation of Pseudoazurin in the 152 kDa Electron Transfer Complex with Nitrite Reductase Determined by Paramagnetic NMR Download bibtex for citation iamge Marcellus Ubbink, Miguel Prudencio, Monica D Vlasie, Ruben Fernandez-Busnadiego
17053 Binding_constants: 1 set
A NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6 An NMR-based docking model for the physiological transient complex between cytochrome f and cytochrome c6 Download bibtex for citation iamge Antonio Diaz-Quintana, Irene Diaz-Moreno, Marcellus Ubbink, Miguel A De la Rosa
16740 Chemical Shifts: 1 set
Amide assignments for Paracoccus denitrificans amicyanin-ZnII. Amicyanin Transfers Electrons from Methylamine Dehydrogenase to Cytochrome c-551i via a Ping-Pong Mechanism, not a Ternary Complex. Download bibtex for citation iamge Angelo Merli, Anneloes Blok, Bernd Ludwig, Chiara Cavalieri, Francesca Meschi, Frank Wiertz, Gian Luigi Rossi, Hendrik A Heering, Linda Klauss, Marcellus Ubbink
16741 Chemical Shifts: 1 set
Backbone assignments for Paracoccus denitrificans amicyanin-CuI. Amicyanin Transfers Electrons from Methylamine Dehydrogenase to Cytochrome c-551i via a Ping-Pong Mechanism, not a Ternary Complex. Download bibtex for citation iamge Angelo Merli, Anneloes Blok, Bernd Ludwig, Chiara Cavalieri, Francesca Meschi, Frank Wiertz, Gian Luigi Rossi, Hendrik A Heering, Linda Klauss, Marcellus Ubbink
7434 Chemical Shifts: 1 set
Backbone assignment of 3F5 heavy chain antibody fragment in its free form and in complex with PABPN1 Structural insight into the recognition of PABPN1 by the flexible loops of a heavy chain antibody fragment Download bibtex for citation iamge Antonietta Impagliazzo, Armand Tepper, Marcellus Ubbink, Silvere M van der Maarel, Theo C Verrips
16586 Chemical Shifts: 1 set
Backbone assignment of 3F5 heavy chain antibody fragment in its free form Structural basis for a PABPN1 aggregation-preventing antibody fragment in OPMD. Download bibtex for citation iamge Antonietta Impagliazzo, Armand W Tepper, Marcellus Ubbink, Silvere M van der Maarel, Theo C Verrips
16024 Chemical Shifts: 1 set
NMR structrure of gallium subsituted ferredoxin Structural and functional characterization of the ga-substituted ferredoxin from Synechocystis sp. PCC6803, a mimic of the native protein. Download bibtex for citation iamge David B Knaff, Jung-Sung Chung, Marcellus Ubbink, Masakazu Hirasawa, Sandra Scanu, Xingfu Xu
15917 Chemical Shifts: 2 sets
TEM-1 BETA-LACTAMASE VARIANT ALLOSTERICALLY REGULATED BY KANAMYCIN Engineering an allosteric binding site for aminoglycosides into TEM1-beta-Lactamase Download bibtex for citation iamge Alexander N Volkov, Christine Evrard, Humberto Barrios, Jacques Fastrez, Jean-Paul Declercq, Marcellus Ubbink, Pascale Mathonet, Patrice Soumillion
15301 Chemical Shifts: 2 sets
Solution model of crosslinked complex of cytochrome c and adrenodoxin Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy Download bibtex for citation iamge Dmitri I Svergun, Frank Hannemann, Marcellus Ubbink, Peter V Konarev, Rita Bernhardt, Wolfgang Reinle, Xingfu Xu
7390 Chemical Shifts: 2 sets
Solution model of crosslinked complex of cytochrome c and adrenodoxin Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy Download bibtex for citation iamge Dmitri I Svergun, Frank Hannemann, Marcellus Ubbink, Peter V Konarev, Rita Bernhardt, Wolfgang Reinle, Xingfu Xu
7370 Chemical Shifts: 1 set
Backbone 1H and 15N chemical shift assignments of D. crassirhizoma Plastocyanin Protonation of a histidine copper ligand in fern plastocyanin Download bibtex for citation iamge Annabelle Mery, Antonio Ranieri, Ellen A Thomassen, Marcellus Ubbink, Marco Sola, Martin Ph Verbeet, Rinske Hulsker, Takamitsu Kohzuma
6113 Chemical Shifts: 1 set
1H, 13C and 15N assignment of the second PDZ domain of the neuronal adaptor protein X11alpha Solution Structure of the Second PDZ Domain of the Neuronal Adaptor X11alpha and its Interaction with the C-terminal Peptide of the Human Copper Chaperone for Superoxide Dismutase Download bibtex for citation iamge Aude E Duquesne, Chris A Spronk, Geerten W Vuister, Gerard W Canters, Jaap Brouwer, Jan W Drijfhout, Marcellus Ubbink, Martina de Ruijter, Sander B Nabuurs
6043 Chemical Shifts: 1 set
1H, 13C and 15N resonance assignment of Cu(I)-Pseudoazurin from Alcaligenes faecalis S-6 Letter to the Editor: 1H, 13C and 15N resonance assignment of Cu(I)-Pseudoazurin from Alcaligenes faecalis S-6 Download bibtex for citation iamge Antonietta Impagliazzo, Marcellus Ubbink
4465 Chemical Shifts: 1 set
The Structural role of the Copper-coordinating and Surface-exposed Histidine Residue in the Blue Copper Protein Azurin The Structural role of the Copper-coordinating and Surface-exposed Histidine Residue in the Blue Copper Protein Azurin Download bibtex for citation iamge Gerard W Canters, Johannes H Bitter, Lars JC Jeuken, Marcellus Ubbink, Pieter van Vliet, W Meyer-Klaucke