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Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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31145 | Chemical Shifts: 1 set |
Graspetide pre-fuscimiditide A1C/T3C variant |
Alternative cross-linking in the graspetide fuscimiditide enables macrocyclic rearrangement
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A Acuna, A J Link, B Choi |
31036 | Chemical Shifts: 1 set |
Aspartimidylated Graspetide Amycolimiditide |
Mechanistic Analysis of the Biosynthesis of the Aspartimidylated Graspetide Amycolimiditide
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A James J Link, Brian Choi, Hader E Elashal, Li Cao |
31023 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching (TC conformation, 53%) |
Accurate de novo design of membrane-traversing macrocycles
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A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31022 | Chemical Shifts: 1 set Spectral_peak_list: 2 sets |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching (CC conformation, 50%) |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31021 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (B-CT conformation) |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31019 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (B-TC conformation) |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
30999 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in d6-DMSO with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31003 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31002 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in CDCl3 with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31001 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
31000 | Chemical Shifts: 1 set Spectral_peak_list: 2 sets |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
30997 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in d6-DMSO with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
30998 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching |
Accurate de novo design of membrane-traversing macrocycles
|
A K Bera, A Lauko, C Glynn, D Baker, D Craik, G Bhardwaj, G G Alpkilic, G T Montelione, J O'Connor, J Palmer, J Rodriguez, L L Dong, L Stewart, M Bick, M Di Piazza, P Hosseinzadeh, R Choi, R Griffin, R Tejero, S Rettie, T A Ramelot, T W Craven, V K Mulligan, W van Voorhis, X Li, Y H Huang |
30961 | Chemical Shifts: 1 set |
Solution structure of spider toxin Ssp1a |
Voltage-Gated Sodium Channel Modulation by a New Spider Toxin Ssp1a Isolated From an Australian Theraphosid
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D T Wilson, F C Cardoso, N L Daly, P M Choi, R J Lewis, Y Dongol |
50909 | Chemical Shifts: 1 set |
Rules for designing protein fold switches and their implications for the folding code |
Design and characterization of a protein fold switching network
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Biao Ruan, Dana Motabar, DTravis Gallagher, Eun J Choi, JOhn Orban, Philip N Bryan, Richard Simmerman, Thomas Kauffman, Tsega Solomon, Yanan He, Yihong Chen, Yingwei Chen |
50910 | Chemical Shifts: 1 set |
Rules for designing protein fold switches and their implications for the folding code |
Design and characterization of a protein fold switching network
|
Biao Ruan, Dana Motabar, D,Travis Gallagher, Eun J Choi, John Orban, Philip N Bryan, Richard Simmerman, Thomas Kauffman, Tsega Solomon, Yanan He, Yihong Chen, Yingwei Chen |
50907 | Chemical Shifts: 1 set |
Rules for designing protein fold switches and their implications for the folding code |
Design and characterization of a protein fold switching network
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Biao Ruan, Dana Motabar, DTravis Gallagher, Eun J Choi, John Orban, Philip N Bryan, Richard Simmerman, Thomas Kauffman, Tsega Solomon, Yanan He, Yihong Chen, Yingwei Chen |
30851 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Aspartimidylated omega ester peptide fuscimiditide |
Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide
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A James J Link, Brian Choi, Hader E Elashal, Heather L White, Joseph D Koos, Li Cao, Michelle A Richardson, Wai Ling L Cheung-Lee |
30849 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Omega ester peptide pre-fuscimiditide |
Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide
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A James J Link, Brian Choi, Hader E Elashal, Heather L White, Joseph D Koos, Li Cao, Michelle A Richardson, Wai Ling L Cheung-Lee |
28009 | Chemical Shifts: 1 set |
HRASG12VGMPPNP |
Engineering subtilisin proteases that specifically degrade active RAS
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Biao Ruan, David A Rozak, David J Weber, D Travis Gallagher, Eric A Toth, Eun Jung J Choi, Gregory Custer, Harlan King, John Orban, Melani Solomon, Philip N Bryan, Raquel Godoy-Ruiz, Richard Simmerman, Ruixue Wang, Silvia Muro, Thomas R Fuerst, Yanan He, Yihong Chen, Yingwei Chen |
28008 | Chemical Shifts: 1 set |
HRASG12VGDP |
Engineering subtilisin proteases that specifically degrade active RAS
|
Biao Ruan, David A Rozak, David J Weber, D Travis Gallagher, Eric A Toth, Eun Jung J Choi, Gregory Custer, Harlan King, John Orban, Melani Solomon, Philip N Bryan, Raquel Godoy-Ruiz, Richard Simmerman, Ruixue Wang, Silvia Muro, Thomas R Fuerst, Yanan He, Yihong Chen, Yingwei Chen |
36133 | Chemical Shifts: 1 set |
Solution structure of BCL-XL bound to P73-TAD peptide |
Cytoplasmic pro-apoptotic function of the tumor suppressor p73 is mediated through a modified mode of recognition of the anti-apoptotic regulator Bcl-XL.
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B C Park, B Kim, B-Y, D Lee, D-H, J Ha, J-H, J H Cho, J Kim, J-H, J Lee, J-Y, J S Choi, J Song, K Bae, K-H, M Lee, M-K, M Lee, M-S, M Yoon, M-K, S A Kim, S Chi, S-W, S G Park, S Kim, S U Choi |
27628 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for SIRT1 183-233 |
An Insulin-Responsive Sensor in the SIRT1 Disordered Region Binds DBC1 and PACS-2 to Control Enzyme Activity.
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Angela M Gronenborn, Daniel L Marks, Gary Thomas, Laura L Thomas, Laurel Thomas, Leonardus Koharudin, Panayiotis V Benos, Shan Luan, Stephanie M Krasnow, Sylvain Auclair, Troy C Krzysiak, Yiqi Qian, You-Jin J Choi |
19514 | Chemical Shifts: 1 set |
HIV-1 gp41 clade C Membrane Proximal External Region peptide in DPC micelle |
Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.
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Barnali Chowdhury, Ellis L Reinherz, Gaetan Bellot, Gerhard Wagner, Jaewon Choi, Likai Song, Lu Yu, Michael S Seaman, Mikyung Kim, Ulrich J Kudahl, Vladimir Brusic, William M Shih, Yuxing Cheng, Zhen-Yu J Sun |
19513 | Chemical Shifts: 1 set |
HIV-1 gp41 clade C Membrane Proximal External Region peptide in DPC micelle |
Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.
|
Barnali Chowdhury, Ellis L Reinherz, Gaetan Bellot, Gerhard Wagner, Jaewon Choi, Likai Song, Lu Yu, Michael S Seaman, Mikyung Kim, Ulrich J Kudahl, Vladimir Brusic, William M Shih, Yuxing Cheng, Zhen-Yu J Sun |
19512 | Chemical Shifts: 1 set |
HIV-1 gp41 clade B double alanine mutant Membrane Proximal External Region peptide in DPC micelle |
Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.
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Barnali Chowdhury, Ellis L Reinherz, Gaetan Bellot, Gerhard Wagner, Jaewon Choi, Likai Song, Lu Yu, Michael S Seaman, Mikyung Kim, Ulrich J Kudahl, Vladimir Brusic, William M Shih, Yuxing Cheng, Zhen-Yu J Sun |
19515 | Chemical Shifts: 1 set |
HIV-1 gp41 clade C Membrane Proximal External Region peptide in DPC micelle |
Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.
|
Barnali Chowdhury, Ellis L Reinherz, Gaetan Bellot, Gerhard Wagner, Jaewon Choi, Likai Song, Lu Yu, Michael S Seaman, Mikyung Kim, Ulrich J Kudahl, Vladimir Brusic, William M Shih, Yuxing Cheng, Zhen-Yu J Sun |
16168 | Chemical Shifts: 1 set |
STRUCTURE OF THE NA,K-ATPASE REGULATORY PROTEIN FXYD1 IN MICELLES |
Structure of the Na,K-ATPase regulatory protein FXYD1 in micelles.
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C M Franzin, F M Marassi, J Choi, P Teriete |
5868 | Chemical Shifts: 1 set |
Solution structure of XPC binding domain of hHR23B |
Solution structure and backbone dynamics of the XPC-binding domain of the human DNA repair protein hHR23B.
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B K Kim, B-S Choi, H J Kim, K-S Ryu, S J Cho |
5553 | Chemical Shifts: 1 set |
Solution structure of influenza A virus C4 promoter |
A Single-nucleotide Natural Variation (U4 to C4) in an Influenza A Virus Promoter Exhibits a Large Structural Change: Implications for Differential Viral RNA Synthesis by RNA-dependent RNA Polymerase
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B-S Choi, C Cheong, C-J Park, H-K Cheong, M-K Lee, S-H Bae |
5528 | Chemical Shifts: 1 set |
Solution structure of the complementary RNA promoter of influenza a virus |
Solution Structure of the Influenza A Virus cRNA Promoter: Implications for Differential Recognition of Viral Promoter Structures by RNA-dependent RNA Polymerase
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B-S Choi, C-J Park, G Varani, M-K Lee, S-H Bae |
4816 | Chemical Shifts: 1 set |
Structural Features of an Influenza Virus Promoter and their Implications for Viral RNA Synthesis |
Structural Features of an Influenza Virus Promoter and Their Implications for Viral RNA Synthesis
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B-S Choi, C Cheong, H-K Cheong, J-H Lee, M Kainosho, S-H Bae |
4651 | Chemical Shifts: 1 set |
Helix 7 Bovine Rhodopsin |
Three Dimensional Structure of the Seventh Transmembrane Helical Domain of the G-Protein Receptor, Rhodopsin
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A Albert, C Danis, G Choi, J Alderfer, P L Yeagle |
4412 | Chemical Shifts: 2 sets |
DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT |
Solution Structure of the DNA Decamer Duplex Containing a 3'-T.T base pair of the cis-syn Cyclobutane Pyrimidine Dimer: Implication for the Mutagenic Property of the cis-syn Dimer
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B -S Choi, J -H Lee, Y -J Choi |
4409 | Chemical Shifts: 2 sets |
DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT |
The Dewar Photoproduct of the Thymidylyl(3' to 5')-thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A rule"
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B S Choi, J H Lee, S H Bae |
4488 | Chemical Shifts: 2 sets |
DNA decamer duplex containing T-T (6-4) photoadduct |
Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct
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B -S Choi, G -S Hwang, J H Lee |