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Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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| Entry ID | Data summary | Entry Title | Citation Title | Authors |
|---|---|---|---|---|
| 36445 | Chemical Shifts: 1 set |
Solution structure of the chimeric peptide of the first SURP domain of Human SF3A1 and the interacting region of SF1. |
Structural basis for the interaction between the first SURP domain of the SF3A1 subunit in U2 snRNP and the human splicing factor SF1
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Kanako Kuwasako, Masayuki Takizawa, Naohiro Kobayashi, Nobukazu Nameki, Shoko Tani, Taiichi Sakamoto, Takayuki Suzuki, Yutaka Muto |
| 36018 | Chemical Shifts: 1 set |
Solution structure of the first RRM domain of human spliceosomal protein SF3b49 |
Solution structure of the first RNA recognition motif domain of human spliceosomal protein SF3b49 and its mode of interaction with a SF3b145 fragment
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Atsuko Sato, Kanako Kuwasako, Kaori Wakamatsu, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Nobukazu Nameki, Peter Guntert, Seizo Takahashi, Shigeyuki Yokoyama, Taiichi Sakamoto, Takaho Terada, Takanori Kigawa, Takuhiro Ito, Yutaka Muto |
| 11575 | Chemical Shifts: 1 set |
SOLUTION STRUCTURE OF THE SECOND PDZ DOMAIN OF HUMAN KIAA1526 PROTEIN |
SOLUTION STRUCTURE OF THE SECOND PDZ DOMAIN OF HUMAN KIAA1526 PROTEIN
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Hua Li, Makoto Inoue, Naoya Tochio, Seizo Koshiba, Shigeyuki Yokoyama, Takanori Kigawa, Yutaka Muto |
| 11574 | Chemical Shifts: 1 set |
SOLUTION STRUCTURE OF THE FIRST PDZ DOMAIN OF HUMAN KIAA1526 PROTEIN |
SOLUTION STRUCTURE OF THE FIRST PDZ DOMAIN OF HUMAN KIAA1526 PROTEIN
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Hua Li, Makoto Inoue, Naoya Tochio, Seizo Koshiba, Shigeyuki Yokoyama, Takanori Kigawa, Yutaka Muto |
| 11563 | Chemical Shifts: 1 set |
Refined solution structure of the first RNA recognition motif domain in CPEB3 |
Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3
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Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Nagata, Yutaka Muto |
| 19609 | Chemical Shifts: 2 sets |
Solution Structure of Protein-RNA Ternary Complex |
Solution Structure of Protein-RNA Ternary Complex
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Akiko Tanaka, Fahu He, Hidehito Kuroyanagi, Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Masatoshi Hagiwara, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Satoru Unzai, Seiko Yoshikawa, Shigeyuki Yokoyama, Takuhiro Ito, Yutaka Muto |
| 11541 | Chemical Shifts: 1 set |
Solution Structure of Protein-RNA Complex |
Solution Structure of Protein-RNA Complex
|
Akiko Tanaka, Fahu He, Hidehito Kuroyanagi, Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Masatoshi Hagiwara, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Satoru Unzai, Seiko Yoshikawa, Shigeyuki Yokoyama, Takuhiro Ito, Yutaka Muto |
| 11499 | Chemical Shifts: 1 set |
Solution structure of RNF146 WWE domain |
Structural insight into the interaction of ADP-ribose with the PARP WWE domains.
|
Fahu He, Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takano Terada, Yutaka Muto |
| 11500 | Chemical Shifts: 1 set |
solution structure of PARP11 WWE domain |
Structural insight into the interaction of ADP-ribose with the PARP WWE domains.
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Fahu He, Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takano Terada, Yutaka Muto |
| 11501 | Chemical Shifts: 1 set |
solution structure of PARP14 WWE domain |
Structural insight into the interaction of ADP-ribose with the PARP WWE domains.
|
Fahu He, Kanako Kuwasako, Kengo Tsuda, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takano Terada, Yutaka Muto |
| 11472 | Chemical Shifts: 1 set |
Complex structure of WWE in RNF146 with ATP |
Complex structure of WWE domain in RNF146 with ATP
|
Fahu He, Makoto Inoue, Mikako Inoue, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yutaka Muto |
| 11456 | Chemical Shifts: 1 set |
Solution structure of the N-terminal dsRBD from RNA helicase A |
Solution structures of the double-stranded RNA-binding domains from RNA helicase A
|
Kengo Tsuda, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Nagata, Yutaka Muto |
| 11457 | Chemical Shifts: 1 set |
Solution structure of the second dsRBD from RNA helicase A |
Solution structures of the double-stranded RNA-binding domains from RNA helicase A
|
Kengo Tsuda, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Nagata, Yutaka Muto |
| 11407 | Chemical Shifts: 1 set |
Assigned chemical shifts of RNA binding domain 3 in RNA (UAUAUA) |
Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3.
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Akiko Tanaka, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Shigeyuki Yokoyama, Sumio Sugano, Takaho Terada, Takanori Kigawa, Tatsuhiko Someya, Yutaka Muto |
| 11406 | Chemical Shifts: 1 set |
Assigned chemical shifts of RNA binding domain 3 in RNA (CUGCUG) |
Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3.
|
Akiko Tanaka, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Peter Guntert, Shigeyuki Yokoyama, Sumio Sugano, Takaho Terada, Takanori Kigawa, Tatsuhiko Someya, Yutaka Muto |
| 11375 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1 with RNA (UUUUU) |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11376 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1 |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11371 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1, D131A mutant |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
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Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11370 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1, C terminal truncated |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11372 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1, K138A mutant |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11373 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1, T134A mutant |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11374 | Chemical Shifts: 1 set |
Assigned chemical shifts of the second RNA recognition motif (RRM) of TIA-1 with RNA (CCCCC) |
Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode.
|
Akiko Tanaka, Chikage Abe, Kanako Kuwasako, Kengo Tsuda, Makoto Inoue, Mari Takahashi, Mikako Shirouzu, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Seiichi Taguchi, Shigeyuki Yokoyama, Takaho Terada, Takanori Kigawa, Yoshihide Hayashizaki, Yutaka Muto |
| 11359 | Chemical Shifts: 1 set |
Assigned chemical shifts of the zf-CW domain with H3 dimethyl K4 peptide |
Structural insight into the zinc finger CW domain as a histone modification reader.
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 11361 | Chemical Shifts: 1 set |
Assigned chemical shifts of the zf-CW domain with H4 trimethyl K20 peptide |
Structural insight into the zinc finger CW domain as a histone modification reader.
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 11362 | Chemical Shifts: 1 set |
Assigned chemical shifts of the zf-CW domain in zinc finger CW-type PWWP domain protein 1 |
Structural insight into the zinc finger CW domain as a histone modification reader.
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 11360 | Chemical Shifts: 1 set |
Assigned chemical shifts of the zf-CW domain with H3 trimethyl K4 peptide |
Structural insight into the zinc finger CW domain as a histone modification reader.
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 11358 | Chemical Shifts: 1 set |
Assigned chemical shifts of the zf-CW domain with H3 peptide |
Structural insight into the zinc finger CW domain as a histone modification reader.
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 11346 | Chemical Shifts: 1 set |
Solution structure of Fn14 CRD domain |
Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily.
|
Akiko Tanaka, Fahu He, Kohei Saito, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Weirong Dang, Yutaka Muto |
| 11115 | Chemical Shifts: 1 set |
Complex structure of the zf-CW domain and the H3K4me3 peptide |
Structural insight into the zinc finger CW domain as a histone modification reader
|
Eiko Seki, Fahu He, Kanako Kuwasako, Kengo Tsuda, Kohei Saito, Mari Takahashi, Masaaki Aoki, Naohiro Kobayashi, Peter Guntert, Satoru Watanabe, Shigeyuki Yokoyama, Takanori Kigawa, Takashi Umehara, Takashi Yabuki, Takayoshi Matsuda, Takushi Harada, Yutaka Muto |
| 10213 | Chemical Shifts: 1 set Residual Dipolar Couplings: 1 set |
Solution structure of the GUCT domain from human ATP-dependent RNA helicase DDX50, DEAD box protein 50 |
Solution structure of the GUCT domain from human RNA helicase II/Gubeta reveals the RRM fold, but implausible RNA interactions.
|
Akiko Tanaka, Kimmo Paakkonen, Manami Sato, Naohiro Kobayashi, Naoya Tochio, Peter Guntert, Satoru Watanabe, Satoshi Ohnishi, Seizo Koshiba, Shigeyuki Yokoyama, Takanori Kigawa, Takushi Harada, Yutaka Muto |
| 11042 | Chemical Shifts: 1 set |
Assigned chemical shifts of RelE |
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Chie Takemoto, Masahito Kawazoe, Mikako Shirouzu, Sakura Suzuki, Shigeyuki Yokoyama, Tatsuya Kaminishi, Yutaka Muto |
| 10004 | Chemical Shifts: 1 set |
1H, 13C and 15N resonance assignments of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus |
1H, 13C and 15N resonance assignments of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus
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Akio Kanai, Gota Kawai, Kiyoshi Okada, Shigeyuki Yokoyama, Taiichi Sakamoto, Takashi Matsuda, Yutaka Muto |
| 6097 | Chemical Shifts: 1 set |
Proton chemical shift assignments for human spliceosomal protein U1C zinc finger domain |
The structure and biochemical properties of the human spliceosomal protein U1C
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Carol V Robinson, Chris Oubridge, Daniel Pomeranz Krummel, David Neuhaus, Helena Hernandez, Kiyoshi Nagai, Yutaka Muto |