|
Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
Member of
![]() |
Entry ID | Data summary | Entry Title | Citation Title | Authors | Additional Matches |
---|---|---|---|---|---|
50803 | Chemical Shifts: 1 set |
Chemical shift assignment of NDRG1-C, the C-terminal domain of NDRG1 |
The Ni(II)-Binding Activity of the Intrinsically Disordered Region of Human NDRG1, a Protein Involved in Cancer Development
|
Barbara Zambelli, Mario Piccioli, Stefano Ciurli, Vittoria Cenni, Ylenia Beniamino | |
50324 | Chemical Shifts: 1 set |
Assigned backbone chemical shifts of DEPTOR-PDZ |
Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace
|
Alex Berndt, Andreas Boland, Conny Wing-Heng Yu, Garib N Murshudov, Glenn R Masson, Jane Wagstaff, Keitaro Yamashita, Madhangopal Anandapadamanaban, Maren Heimhalt, Mark Skehel, Olga Perisic, Roger Williams, Sarah Maslen, Stefan Freund, Stephen McLaughlin, Xiaodan Ni | |
50326 | Chemical Shifts: 1 set |
Backbone chemical shift assignment of the linker region of DEPTOR |
Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace
|
Alex Berndt, Andreas Boland, Conny Wing-Heng Yu, Garib N Murshudov, Glenn R Masson, Jane Wagstaff, Keitaro Yamashita, Madhangopal Anandapadamanaban, Maren Heimhalt, Mark Skehel, Olga Perisic, Roger Williams, Sarah Maslen, Stefan Freund, Stephen McLaughlin, Xiaodan Ni | |
50325 | Chemical Shifts: 1 set |
Backbone chemical shift assignment of the FRB domain of mTOR |
Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace
|
Alex Berndt, Andreas Boland, Conny Wing-Heng Yu, Garib N Murshudov, Glenn R Masson, Jane Wagstaff, Keitaro Yamashita, Madhangopal Anandapadamanaban, Maren Heimhalt, Mark Skehel, Olga Perisic, Roger Williams, Sarah Maslen, Stefan Freund, Stephen McLaughlin, Xiaodan Ni | |
28109 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for human P[4] rotavirus strain BM5265 |
Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens
|
Elsa Grace G Jacob, Kristen Rose R McGinnis, Michael A Kennedy, Michael Robert R Stuckert, Ming Tan, Pengwei Huang, Riley Erin E Burnside, Shenyuan Xu, Shuisong Ni, Xi Jiang, Yang Liu | |
34257 | Chemical Shifts: 1 set |
Solution structure of the Ni metallochaperone HypA from Helicobacter pylori |
Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools
|
Barbara Zambelli, Benjamin Bardiaux, Chris Spronk, D Scott S Merrell, Faith C Blum, Francesco Musiani, Heidi Hu, Mario Piccioli, Michael Maroney, Michal Gorka, Priyanka Basak, Ryan C Johnson, Stefano Ciurli, Szymon Zerko, Wiktor Kozminski | |
30422 | Chemical Shifts: 1 set |
Solution structure of the zebrafish granulin AaE |
Structure Dissection of Zebrafish Progranulins Identifies a Well-Folded Granulin/Epithelin Module Protein with pro-Cell Survival Activities
|
A Bateman, B K Chitramuthu, F Ni, H PJ Bennett, P Wang, P Xu | |
30121 | Chemical Shifts: 1 set |
Atomic Resolution Structure of Monomorphic AB42 Amyloid Fibrils |
Atomic Resolution Structure of Monomorphic AB42 Amyloid Fibrils.
|
B Frohm, B Michael, I V Sergeyev, J S Wall, K J Donovan, M Rosay, M T Colvin, Q Z Ni, R G Griffin, R Silvers, S Linse, T V Can, Y Su | |
25788 | Chemical Shifts: 1 set |
Two-fold symmetric structure of the 18-60 construct of S31N M2 from Influenza A in lipid bilayers |
Structure and Mechanism of the Influenza A M218-60 Dimer of Dimers
|
Eric A Miller, Guido Pintacuda, James J Chou, Loren B Andreas, Lyndon Emsley, Marcel Reese, Matthew T Eddy, Qing Zhe Ni, Robert G Griffin, Vladimir Gelev | |
25173 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for N-terminal domain of NikR |
On the interaction of Helicobacter pylori NikR, a Ni(II)-responsive transcription factor, with the urease operator: in solution and in silico studies
|
Barbara Zambelli, Francesco Musiani, Luca Mazzei, Olena Dobrovolska, Stefano Ciurli | |
18326 | Chemical Shifts: 1 set |
1H, 13C, and 15N resonance assignments of Ni(II)-NmtR |
1H, 13C, and 15N resonance assignments of NmtR, a Ni(II)/Co(II) metalloregulatory protein of Mycobacterium tuberculosis.
|
Chul Won Lee, David P Giedroc | |
18263 | Chemical Shifts: 1 set Spectral_peak_list: 2 sets |
Solution NMR of the specialized apo-acyl carrier protein (RPA2022) from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR324 |
Solution NMR structure of the specialized apo-acyl carrier protein RPA2022 from Rhodopseudomonas palustris refined with NH RDCs. Northeast Structural Genomics Consortium Target RpR324.
|
Farhad Forouhar, Gaetano T Montelione, Hsiau-Wei Lee, James H Prestegard, Jayararaman Seetharaman, John F Hunt, John K Everett, Michael A Kennedy, Paolo A Rossi, Rong Xiao, Sarah Unser, Scott Lew, Shuisong Ni, Theresa Ramelot, Thomas B Acton, Yunhuang Yang | |
18032 | Chemical Shifts: 1 set |
Solution NMR structure of the specialized holo-acyl carrier protein RPA2022 from Rhodopseudomonas palustris refined with NH RDCs. Northeast Structural Genomics Consortium Target RpR324. |
Solution NMR structure of the specialized holo-acyl carrier protein RPA2022 from Rhodopseudomonas palustris refined with NH RDCs. Northeast Structural Genomics Consortium Target RpR324.
|
Burkhard Ross, Colleen Ciccosanti, Gaetano T Montelione, Haleema Janjua, Hsiau-Wei Lee, Huang Wang, James H Prestegard, John K Everett, Melissa Maglaqui, Michael A Kennedy, Paolo A Rossi, Rajesh Nair, Rong Xiao, Shuisong Ni, Theresa A Ramelot, Thomas B Acton, Yunhuang Yang | |
18003 | Chemical Shifts: 2 sets |
solution structure of apo-NmtR |
Solution structure of Mycobacterium tuberculosis NmtR in the apo state: insights into Ni(II)-mediated allostery.
|
Chul Won Lee, David P Giedroc, Dhruva K Chakravorty, Feng-Ming James Chang, Hermes Reyes-Caballero, Kenneth M Merz, Yuzhen Ye | |
16849 | Chemical Shifts: 1 set |
NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin |
An NMR structural study of nickel-substituted rubredoxin.
|
Anjos L Macedo, Brian F Volkman, Brian J Goodfellow, I Moura, Iven CN Duarte, John L Markley, Jose JG Moura, Sofia G Nunes | |
7279 | Chemical Shifts: 1 set |
NMR resonance assignments of the human non-chromitin architectural transcription factor HMGA1 |
NMR resonance assignments of the human high mobility group protein HMGA1.
|
Garry W Buchko, Michael A Kennedy, Natacha M Lourette, Raymond Reeves, Shuisong Ni | |
7189 | Chemical Shifts: 2 sets |
NMR assignments of the low molecular weight protein tyrosine phosphatase from Campylobacter Jejuni |
Three-dimensional structure and ligand interactions of the low molecular weight protein tyrosine phosphatase from Campylobacter jejuni
|
David C Watson, Dmitri Tolkatchev, Feng Ni, Josee Plamondon, N Martin Young, Ping Xu, Rustem Shaykhutdinov | |
6343 | Chemical Shifts: 1 set |
Backbone and side chain 1H, 13C, and 15N chemical shift assignments of PA1324 (21-170): Northeast Structural Genomics Consortium Target PaP1 |
Chemical shift assignments of PA1324 (21-170)
|
John R Cort, Michael A Kennedy, Shuisong Ni | |
5933 | Chemical Shifts: 1 set |
Sequence-specific backbone and sidechain resonance assignments of the Ste50 binding domain of the MAPKKK Ste11 |
Solution structure of the dimeric SAM domain of MAPKKK Ste11 and its interactions with the adaptor protein Ste50 from the budding yeast: implications for Ste11 activation and signal transmission through the Ste50-Ste11 complex
|
C Wu, Feng Ni, M Whiteway, Ping Xu, R Gingras, R Shaykhutdinov, Surajit Bhattacharjya | |
5715 | T1 Relaxation Values: 1 set |
Paramagnetic relaxation enhancements of the amide protons in HHP-tagged thioredoxin |
Binding ability of a HHP-tagged protein towards Ni(2+) studied by paramagnetic NMR relaxation: The possibility of obtaining long-range structure information.
|
Connie Lauritzen, Jens J Led, John Pedersen, Malene R Jensen, Soren W Dahl | |
5589 | Chemical Shifts: 1 set |
Backbone and side chain 1H, 13C, and 15N chemical shift assignments for V. cholerae VC0424 |
Solution structure of Vibrio cholorae protein VC0424: A variation of the Ferredoxin-like fold
|
B Honig, J R Cort, M A Kennedy, S Goldsmith-Fischman, S Ni, Theresa A Ramelot | |
5570 | Chemical Shifts: 1 set |
1H, 13C, and 15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans |
Letter to the Editor: 1H, 13C, and 15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans
|
Garry W Buchko, Michael A Kennedy, Shusoing Ni, Stephen R Holbrook | |
4971 | Chemical Shifts: 1 set |
NMR data for the Carp Granulin 1 3-30 subfragment |
Solution structures of a 30 residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.
|
F Ni, H P Bennett, S James, W F Vranken | |
4969 | Chemical Shifts: 1 set |
Backbone 1H, 13C and 15N chemical shift assignments for the Brucella D4.4 VH antibody fragment |
Solution Structure of a Llama Single-domain Antibody with Hydrophobic Residues typical of the VH/VL Interface
|
Dmitri Tolkatchev, Feng Ni, Jamshid Tanha, Ping Xu, Saran Narang, Wim F Vranken, Zhigang Chen | |
4656 | Chemical Shifts: 1 set |
Design and Solution Structure of a Well-folded Stack of Two Beta-hairpins Based on the Amino-terminal Fragment of Human Granulin A |
Design and Solution Structure of a Well-folded Stack of Two Beta-hairpins Based on the Amino-terminal Fragment of Human Granulin A
|
A Ng, D Tolkatchev, F Ni, W Vranken | |
4645 | Chemical Shifts: 1 set |
A Peptide Derived from the C-Terminal Part of a Plant Cysteine Protease Folds into a Stack of Two Beta-Hairpins, a Scaffold Present in the Emerging Family of Granulin-Like Growth Factors |
A Peptide Derived from the C-Terminal Part of a Plant Cysteine Protease Folds into a Stack of Two Beta-Hairpins, a Scaffold Present in the Emerging Family of Granulin-Like Growth Factors
|
D Tolkatchev, F Ni, P Xu | |
4778 | Chemical Shifts: 1 set |
Backbone 1HN, 15N and 13C shifts for GMPPNP-loaded Cdc42 from Candida albicans |
Efficient expression of isotopically labeled peptides for high resolution NMR studies: application to the Cdc42/Rac binding domains of virulent kinases in Candida albicans
|
Feng Ni, Michael J Osborne, V Sridaran, Z Su | |
4770 | Chemical Shifts: 1 set |
Backbone 1HN, 15N and 13C shifts for GDP-loaded Cdc42 from Candida albicans |
Efficient expression of isotopically labeled peptides for high resolution NMR studies: Application to the Cdc42/Rac binding domains of virulent kinases in Candida albicans
|
Feng Ni, Michael J Osborne, Vasanth Sridaran, Zhengding Su | |
4351 | Chemical Shifts: 1 set Coupling Constants: 1 set |
A 30-residue Fragment of the Carp Granulin-1 Protein Folds into a Stack of two Beta-hairpins Similar to that found in the Native Protein |
A 30-residue Fragment of the Carp Granulin-1 Protein Folds into a Stack of two Beta-hairpins Similar to that found in the Native Protein
|
Feng Ni, Hugh PJ Bennett, Ping Xu, Susan James, Wim F Vranken, Z G Chen | |
401 | Chemical Shifts: 1 set |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen
|
Feng Ni, H A Scheraga, Lea Doerr Bullock, Meheryar N Rivetna, Yasuo Konishi | |
490 | Chemical Shifts: 1 set |
Thrombin-Bound Conformation of the C-Terminal Fragments of Hirudin Determined by Transferred Nuclear Overhauser Effects |
Thrombin-Bound Conformation of the C-Terminal Fragments of Hirudin Determined by Transferred Nuclear Overhauser Effects
|
Feng Ni, H A Scheraga, Yasuo Konishi | |
417 | Chemical Shifts: 1 set |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen
|
Feng Ni, H A Scheraga, Lea Doerr Bullock, Meheryar N Rivetna, Yasuo Konishi | |
402 | Chemical Shifts: 1 set |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen |
High-Resolution NMR Studies of Fibrinogen-like Peptides in Solution: Structural Basis for the Bleeding Disorder Caused by a Single Mutation of Gly(12) to Val(12) in the Aalpha Chain of Human Fibrinogen Rouen
|
Feng Ni, H A Scheraga, Lea Doerr Bullock, Meheryar N Rivetna, Yasuo Konishi | |
15375 | Chemical Shifts: 1 set |
Nickel substitued Rubredoxin from Desulfovibrio Vulgaris |
An NMR structural study of nickel-substituted rubredoxin.
|
Anjos L Macedo, Brian F Volkman, Brian J Goodfellow, I Moura, Iven CN Duarte, John L Markley, Jose JG Moura, Sofia G Nunes | Entity name: NI |
4313 | Chemical Shifts: 1 set Coupling Constants: 1 set Residual Dipolar Couplings: 2 sets |
1H, 13C and 15N NMR Assignments for a Carbon Monoxide Generating Metalloenzyme from Klebsiella pneumoniae, Acireductone Dioxygenase (ARD) |
|
Sunsine C Joel, Susan S Pochapsky, Thomas C Pochapsky | Entity name: NI |
4089 | Chemical Shifts: 1 set |
Peptide Deformylase Catalytic Core (Residues 1 - 147) |
Solution Structure of Nickel-peptide Deformylase
|
C LAZENNEC, F DARDEL, S BLANQUET, S RAGUSA, T MEINNEL | Entity name: NI |