Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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51692 | Chemical Shifts: 1 set |
Sidechain Ile, Leu, and Val methyl Chemical Shift Assignments for Penicillin Binding Protein 5 | Molecular basis of b-lactam antibiotic resistance of ESKAPE bacterium E. faecium Penicillin Binding Protein PBP5 | Andre Da Silva Santiago, Charlene Desbonnet, Everton D D'Andrea, Ganesan Senthil S Kumar, Louis B Rice, Marta V Schoenle, Meng S Choy, Michel Arthur, Rebecca Page, Wolfgang Peti, Yamanappa Hunashal |
51690 | Chemical Shifts: 1 set |
Sequence Specific 1H, 13C, and 15N backbone resonance assignments of 70 kDa Penicillin Binding Protein PBP5 | Molecular basis of b-lactam antibiotic resistance of ESKAPE bacterium E. faecium Penicillin Binding Protein PBP5 | Andre Da Silva Santiago, Charlene Desbonnet, Everton D D'Andrea, Ganesan Senthil S Kumar, Louis B Rice, Marta V Schoenle, Meng S Choy, Michel Arthur, Rebecca Page, Wolfgang Peti, Yamanappa Hunashal |
51654 | Chemical Shifts: 1 set |
Backbone N and HN Chemical Shift Assignments for RBPMS-A (1-122) | Phosphorylation of the smooth muscle master splicing regulator RBPMS regulates its splicing activity | Christopher Smith, Clare Gooding, Erick E Nakagaki-Silva, Katherine Stott, Mariavittoria Pizzinga, Michael D Barnhart, Thomas H Hammond, Yi Yang |
50938 | Chemical Shifts: 2 sets |
Natural Teixobactin - Lipid II complex | Teixobactin kills bacteria by a two-pronged attack on the cell envelope | Aaron J Peoples, Adela Melcrova, Alexandre Bonvin, Amy L Spoering, Bram Vermeulen, Chelsea R Jones, Dallas E Hughes, Eefjan Breukink, Francesca Lavore, Harold D MacGillavry, James S Nowick, Joao Medeiros-Silva, Joseph H Lorent, Kim Lewis, Lea Marie M Becker, Losee L Ling, Maik Derks, Markus Weingarth, Michael A Morris, Moreno Lelli, Raj Kumar, Rhythm Shukla, Roy van Beekveld, Sourav Maity, Wouter H Roos, Xiaoqi Wang |
30717 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Hs05 - Intragenic antimicrobial peptide | Characterization of novel human intragenic antimicrobial peptides, incorporation and release studies from ureasil-polyether hybrid matrix | A L Oliveira, A R Araujo, B Lira, C Bloch, E A Barbosa, E M Carmo da Silva, G D Brand, G H Mariano, J A Chaker, J L Cardozo Fh, J Leite, L G Gomes de Sa, M A Santos, M Ramada |
30716 | Chemical Shifts: 1 set |
Stigmurin | NMR three-dimensional structure of the cationic peptide Stigmurin from Tityus stigmurus scorpion venom: In vitro antioxidant and in vivo antibacterial and healing activity | A D Silva, A D Silva-Junior, E CG Santos, H Rocha, J M Resende, M FF Pedrosa, M FQ Neto, R M Araujo, S CS Rodrigues |
30587 | Chemical Shifts: 1 set |
Syn-safencin 24 | Synthetic Antimicrobial Peptide Tuning Permits Membrane Disruption and Interpeptide Synergy | A James J Mason, Albert Siryaporn, Alejandro J Gonzalez, Charlotte K Hind, Francisco R Fields, Francis J Castellino, Giorgia Manzo, Henry M Vu, Ilona P Foik, Jeshina Janardhanan, Jessica N Ross, J Mark M Sutton, Mayland Chang, Melanie Clifford, Phoebe Do D Carmo Silva, Rashna D Balsara, Shaun Lee, Tam T Bui, Veronica R Kalwajtys, Victoria A Ploplis |
30586 | Chemical Shifts: 1 set |
Syn-safencin | Synthetic Antimicrobial Peptide Tuning Permits Membrane Disruption and Interpeptide Synergy | A James J Mason, Albert Siryaporn, Alejandro J Gonzalez, Charlotte K Hind, Francisco R Fields, Francis J Castellino, Giorgia Manzo, Henry M Vu, Ilona P Foik, Jeshina Janardhanan, Jessica N Ross, J Mark M Sutton, Mayland Chang, Melanie Clifford, Phoebe Do D Carmo Silva, Rashna D Balsara, Shaun Lee, Tam T Bui, Veronica R Kalwajtys, Victoria A Ploplis |
30588 | Chemical Shifts: 1 set |
Syn-safencin 56 | Synthetic Antimicrobial Peptide Tuning Permits Membrane Disruption and Interpeptide Synergy | A James J Mason, Albert Siryaporn, Alejandro J Gonzalez, Charlotte K Hind, Francisco R Fields, Francis J Castellino, Giorgia Manzo, Henry M Vu, Ilona P Foik, Jeshina Janardhanan, Jessica N Ross, J Mark M Sutton, Mayland Chang, Melanie Clifford, Phoebe Do D Carmo Silva, Rashna D Balsara, Shaun Lee, Tam T Bui, Veronica R Kalwajtys, Victoria A Ploplis |
34346 | Chemical Shifts: 1 set |
NMR Structure of Big-defensin 1 from oyster Crassostrea gigas | The Ancestral N-Terminal Domain of Big Defensins Drives Bacterially Triggered Assembly into Antimicrobial Nanonets. | A Bressan, A F Delmas, A Vergnes, C Barreto, C Cazevielle, D Destoumieux-Garzon, E Bachere, H Marchandin, H Meudal, J Da Silva, K Loth, L Touqui, N Belmadi, P Bulet, R D Rosa, S N Voisin, V Aucagne |
34345 | Chemical Shifts: 1 set |
NMR Structure of Big-defensin 1 [44-93] from oyster Crassostrea gigas | The Ancestral N-Terminal Domain of Big Defensins Drives Bacterially Triggered Assembly into Antimicrobial Nanonets. | A Bressan, A F Delmas, A Vergnes, C Barreto, C Cazevielle, D Destoumieux-Garzon, E Bachere, H Marchandin, H Meudal, J Da Silva, K Loth, L Touqui, N Belmadi, P Bulet, R D Rosa, S N Voisin, V Aucagne |
27690 | Chemical Shifts: 1 set |
MtFKBP | Backbone and side chain 1H, 15N and 13C assignments of a putative peptidyl prolyl cis-trans isomerase FKBP12 from Mycobacterium tuberculosis | Cristiane D Anobom, Danielle MP Oliveira, Fabio CL Almeida, Guilherme C Andrade, Jose RM Pires, Luis FC Silva |
30527 | Chemical Shifts: 1 set |
De novo Designed Protein Foldit3 | De novo protein design by citizen scientists. | Aaron Bauer, Alexander Boykov, Alex Ford, Brian Koepnick, Daniel-Adriano A Silva, David Baker, Firas Khatib, Foldit Players, Frank DiMaio, Gaetano T Montelione, Gaohua Liu, Jeff Flatten, Linda Wei, Matthew J Bick, Roger D Estep, Seth Cooper, Susan Kleinfelter, Tamir Husain, Toke Norgard-Solano, Yojiro Ishida, Zoran Popovic |
30448 | Chemical Shifts: 1 set |
HRFLRH peptide NMR structure in the presence of CO2 | A Previously Undescribed Hexapeptide His-Arg-Phe-Leu-Arg-His-NH2 From Amphibian Skin Secretion shows CO2 and Metal Biding Affinities | A Lopez-Castillo, C Bloch Jr, C J Nascimento, D AT Pires, L MR Arake, L P Silva, M V Prates |
30449 | Chemical Shifts: 1 set |
HRFLRH peptide NMR structure in the presence of Zn(II) | A Previously Undescribed Hexapeptide His-Arg-Phe-Leu-Arg-His-NH2 From Amphibian Skin Secretion shows CO2 and Metal Biding Affinities | A Lopez-Castillo, C Bloch Jr, C J Nascimento, D AT Pires, L MR Arake, L P Silva, M V Prates |
30447 | Chemical Shifts: 1 set |
HRFLRH peptide NMR structure in the presence of Cd(II) | A Previously Undescribed Hexapeptide His-Arg-Phe-Leu-Arg-His-NH2 From Amphibian Skin Secretion shows CO2 and Metal Biding Affinities | A Lopez-Castillo, C Bloch Jr, C J Nascimento, D AT Pires, L MR Arake, L P Silva, M V Prates |
30446 | Chemical Shifts: 1 set |
HRFLRH peptide NMR structure | A Previously Undescribed Hexapeptide His-Arg-Phe-Leu-Arg-His-NH2 From Amphibian Skin Secretion shows CO2 and Metal Biding Affinities | A Lopez-Castillo, C Bloch Jr, C J Nascimento, D AT Pires, L MR Arake, L P Silva, M V Prates |
30396 | Chemical Shifts: 1 set Spectral_peak_list: 4 sets |
The clavanin peptide in the presence of TFE (2,2,2-trifluoroethanol), presented a amphipathic alpha-helices from Phe-2 to Val-22 residues | Structural Studies of a Lipid-Binding Peptide from Tunicate Hemocytes with Anti-Biofilm Activity. | A L Oliveira, A S Veiga, C A Andrade, C de la Fuente-Nunez, D Gaspar, E S Alves, I C Fensterseifer, J M Nascimento, J R Correa, L M Liao, M A Castanho, O L Franco, O N Silva, R E Hancock, S Korpole, S M Mandal, S M Ribeiro, W F Porto |
30368 | Chemical Shifts: 1 set |
Solution NMR structure of Brd3 ET domain bound to Brg1 peptide | The BRD3 ET domain recognizes a short peptide motif through a mechanism that is conserved across chromatin remodelers and transcriptional regulators | Amy E Campbell, Ana Silva, Ann H Kwan, Bin Lu, Cherry Kwong, Christopher R Vakoc, Dorothy Wai, Gerd A Blobel, James D Chalmers, Jason Low, Joel P Mackay, Lorna E Wilkinson-White, Roland Gamsjaeger, Taylor N Szyszka, Wayne M Patrick |
30367 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
Solution NMR structures of the BRD3 ET domain in complex with a CHD4 peptide | The BRD3 ET domain recognizes a short peptide motif through a mechanism that is conserved across chromatin remodelers and transcriptional regulators | Amy E Campbell, Ana Silva, Ann H Kwan, Bin Lu, Cherry Kwong, Christopher R Vakoc, Dorothy Wai, Gerd A Blobel, James D Chalmers, Jason Low, Joel P Mackay, Lorna E Wilkinson-White, Roland Gamsjaeger, Taylor N Szyszka, Wayne M Patrick |
30364 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design7.2 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30365 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design7.3a | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30366 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design7.3a | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30362 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design12_ss | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30361 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design11_ss | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30360 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design10.2 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30359 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design10.1 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30358 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design9.1 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30357 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design8.2 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30363 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design14_ss | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30355 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle Design8.1 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30356 | Chemical Shifts: 1 set |
Solution structure of de novo macrocycle design7.1 | Comprehensive computational design of ordered peptide macrocycles. | D A Silva, D Baker, D E Kim, F Pardo-Avila, G Bhardwaj, G Varani, I K Webb, J N Adkins, J R Cort, M D Shortridge, P Hosseinzadeh, S A Rettie, T W Craven, V K Mulligan, Y M Ibrahim |
30058 | Chemical Shifts: 1 set |
DIY G-Quadruplexes: Solution Structure of d(GGGGTTTGGGGTTTTGGGGAAGGGG) in sodium | Encoding canonical DNA quadruplex structure. | Andreas I Karsisiotis, Mateus Webba da Silva, Scarlett A Dvorkin |
30056 | Chemical Shifts: 1 set |
DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTGG) in sodium | Encoding canonical DNA quadruplex structure. | Andreas I Karsisiotis, Mateus Webba da Silva, Scarlett A Dvorkin |
30055 | Chemical Shifts: 1 set |
DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTTGG) in sodium | Encoding canonical DNA quadruplex structure. | Andreas I Karsisiotis, Mateus Webba da Silva, Scarlett A Dvorkin |
30045 | Chemical Shifts: 1 set |
DIY G-Quadruplexes: Solution structure of d(GGGTTTGGGTTTTGGGAGGG) in sodium | Encoding canonical DNA quadruplex structure. | Andreas I Karsisiotis, Mateus Webba da Silva, Scarlett A Dvorkin |
19572 | Chemical Shifts: 1 set |
Solution NMR structure of quadruplex d(TGGGTTTGGGTTGGGTTTGGG) in sodium conditions. | In preparation | Andreas Ioannis Karsisiotis, Mateus Webba da Silva, Paul Dillon |
19571 | Chemical Shifts: 2 sets |
Solution NMR structure of the d(GGGTTTTGGGTGGGTTTTGGG) quadruplex in sodium conditions. | Encoding canonical DNA quadruplex structure. | Andreas I Karsisiotis, Mateus Webba da Silva, Scarlett A Dvorkin |
19158 | Chemical Shifts: 2 sets |
Solution NMR structure of the d(GGGTTGGGTTTTGGGTGGG) quadruplex in sodium conditions | DNA quadruplex folding formalism--a tutorial on quadruplex topologies. | Andreas Ioannis Karsisiotis, Christopher Webba da Silva |
19159 | Chemical Shifts: 2 sets |
Solution NMR structure of the d(GGGGTTGGGGTTTTGGGGAAGGGG) quadruplex in sodium conditions | DNA quadruplex folding formalism--a tutorial on quadruplex topologies. | Andreas Ioannis Karsisiotis, Christopher Webba da Silva |
16261 | Chemical Shifts: 1 set |
1H, 15N, 13C assignments of the Riphicephalus (Boophilus) microplus antimicrobial protein microplusin | (1)H, (15)N and (13)C assignments of the Rhipicephalus (Boophilus) microplus anti-microbial peptide microplusin. | Carlos A Rezende, Fernanda D Silva, Jose R Pires, Sirlei Daffre |
16198 | Chemical Shifts: 1 set |
1H, 13C and 15N backbone and side chain chemical shift assignments of N-terminal domain of Tim23. | 1H.13C and 15N backbone and side-chain resonance assignments of N-terminal domain of a mitochondrial inner membrane translocase (TIM23) from S. cerevisiae | Anushikha Thakur, Chittoor Balasubramanyam, Hanudatta S Atreya, Patrick D Silva |
6412 | Chemical Shifts: 1 set Coupling Constants: 1 set |
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY | The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, Fernanda D Silva, Mauricio L Sforca, M Teresa Miranda, Rita C Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |
6414 | Chemical Shifts: 1 set |
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY | The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, Fernanda D Silva, Mauricio L Sforca, M Teresa Miranda, Rita C Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |
6411 | Chemical Shifts: 1 set |
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY | The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, Fernanda D Silva, Mauricio L Sforca, M Teresa Miranda, Rita C Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |
6413 | Chemical Shifts: 1 set Coupling Constants: 1 set |
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY | The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, Fernanda D Silva, Mauricio L Sforca, M Teresa Miranda, Rita C Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |
6360 | Chemical Shifts: 1 set |
IDENTIFICATION OF MINIMAL PEPTIDE SEQUENCE IN THE AMIDATED FRAGMENT 33-61 OF BOVINE a-HEMOGLBIN | The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, Fernanda D Silva, Mauricio L Sforca, M Teresa Miranda, Rita C Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |
6048 | Chemical Shifts: 1 set Coupling Constants: 1 set |
NEW STRUCTURAL FAMILY OF AN ANTIMICROBIAL PEPTIDE DERIVED FROM BOVINE HEMOGLOBIN | The Micelle-Bound Structure of an Antimicrobial Peptide Derived from the alpha-Chain of Bovine Hemoglobin Isolated from the Tick Boophilus microplus. | Alberto Spisni, Alessandra Machado, Antonio Miranda, F D Silva, Maria TM Miranda, Mauricio L Sforca, Rita CR Figueredo, Sergio Oyama, Sirlei Daffre, Thelma A Pertinhez |