Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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51634 | Chemical Shifts: 1 set |
Main chain assignment of a RFFL fragment (26-145 aa). | Identification of alpha-Tocopherol succinate as an RFFL-substrate interaction inhibitor inducing peripheral CFTR stabilization and apoptosis | Anju Tashiro, Ayuka Iwasaki, Daichi Egami, Hiroyuki Kumeta, Hiroyuki Osada, Kaori Honda, Keitaro Inoue, Miho Yamaguchi, Noriaki Hirata, Ryosuke Fukuda, Sachiho Taniguchi, Shogo Taniguchi, Shunsuke Aoki, Tomohide Saio, Tsukasa Okiyoneda, Yasumitsu Kondoh, Yuji Ono, Yukako Doi, Yuta Matsuura |
26312 | Chemical Shifts: 1 set |
Ufm1 | Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1. | Eiki Kominami, Eri Sakata, Hiroaki Sasakawa, Kanako Tatsumi, Keiji Tanaka, Koichi Kato, Masaaki Komatsu, Yoshiki Yamaguchi |
36405 | Chemical Shifts: 1 set Heteronuclear NOE Values: 1 set |
Solution structure of RPB6, common subunit of RNA polymerases I, II, and III | Three human RNA polymerases interact with TFIIH via a common RPB6 subunit | H Suzuki, M Okuda, T Suwa, Y Nishimura, Y Yamaguchi |
50522 | Chemical Shifts: 1 set |
NMR assignment of Fc fragment of mouse immunoglobulin G2b glycoprotein galactosylated (G2) glycoform | NMR assignments of the N-glycans of the Fc fragment of mouse immunoglobulin G2b glycoprotein. | Ichio Shimada, Koichi Kato, Rina Yogo, Saeko Yanaka, Takeshi Takizawa, Yohei Miyanoiri, Yoshiki Yamaguchi |
50515 | Chemical Shifts: 1 set |
NMR assignments of the Fc fragment of mouse immunoglobulin G2b glycoprotein non-galactosylated (G0) glycoform | NMR assignments of the N-glycans of the Fc fragment of mouse immunoglobulin G2b glycoprotein. | Ichio Shimada, Koichi Kato, Rina Yogo, Saeko Yanaka, Takeshi Takizawa, Yohei Miyanoiri, Yoshiki Yamaguchi |
50132 | Chemical Shifts: 1 set |
Backbone 1H and 15N chemical shift assignments of chimeric SC Sup35NM, 5MT-A | Short Disordered Protein Segment Regulates Cross-Species Transmission of a Yeast Prion | Kazuo Kuwata, Michael Feig, Motomasa Tanaka, Takao Yoda, Toshinobu Shida, Yoshiki Yamaguchi, Yuji O Kamatari, Yuji Sugita, Yumiko Ohhashi |
50134 | Chemical Shifts: 1 set |
Backbone 1H and 15N chemical shift assignments of chimeric SC Sup35NM, 4MT-A | Short Disordered Protein Segment Regulates Cross-Species Transmission of a Yeast Prion | Kazuo Kuwata, Michael Feig, Motomasa Tanaka, Takao Yoda, Toshinobu Shida, Yoshiki Yamaguchi, Yuji O Kamatari, Yuji Sugita, Yumiko Ohhashi |
50133 | Chemical Shifts: 1 set |
Backbone 1H and 15N chemical shift assignments of chimeric SC Sup35NM, 5MT-B | Short Disordered Protein Segment Regulates Cross-Species Transmission of a Yeast Prion | Kazuo Kuwata, Michael Feig, Motomasa Tanaka, Takao Yoda, Toshinobu Shida, Yoshiki Yamaguchi, Yuji O Kamatari, Yuji Sugita, Yumiko Ohhashi |
50131 | Chemical Shifts: 1 set |
Backbone 1H and 15N chemical shift assignments of KL Sup35NM | Short Disordered Protein Segment Regulates Cross-Species Transmission of a Yeast Prion | Kazuo Kuwata, Michael Feig, Motomasa Tanaka, Takao Yoda, Toshinobu Shida, Yoshiki Yamaguchi, Yuji O Kamatari, Yuji Sugita, Yumiko Ohhashi |
12016 | Chemical Shifts: 1 set |
Backbone 1H and 15N Chemical Shift Assignments for Sup35NM | Molecular basis for diversification of yeast prion strain conformation | Boran Uluca, Henrike Heise, Henrik Muller, Hiroshi Kurahashi, Kazuo Kuwata, Motomasa Tanaka, Shinju Sugiyama, Shinya Hanashima, Timo Piechatzek, Toshinobu Shida, Yoshiki Yamaguchi, Yuji O Kamatari, Yumiko Ohhashi, Yusuke Komi |
26792 | Chemical Shifts: 1 set |
Backbone assignment of p23 GOLD domain | 3D structure and interaction of p24beta and p24delta Golgi dynamics domains: implications for p24 complex formation and cargo transport | Kana Morita-Matsumoto, Masamichi Nagae, Morihisa Fujita, Romina Theiler, Taroh Kinoshita, Tetsuya Hirata, Yoshiki Yamaguchi |
26793 | Chemical Shifts: 1 set |
Backbone assignment of p24 GOLD domain | 3D structure and interaction of p24beta and p24delta Golgi dynamics domains: implications for p24 complex formation and cargo transport | Kana Morita-Matsumoto, Masamichi Nagae, Morihisa Fujita, Romina Theiler, Taroh Kinoshita, Tetsuya Hirata, Yoshiki Yamaguchi |
26783 | Chemical Shifts: 1 set |
APC11 binding Ubiquitin Variant | Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. | Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu |
26784 | Chemical Shifts: 1 set |
Ubiquitin Variant in complex with APC11 | Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. | Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu |
26785 | Chemical Shifts: 1 set |
APC11 in complex with Ubiquitin Variant | Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. | Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu |
26641 | Chemical Shifts: 1 set |
Backbone assignments for E. coli MurD | Ligand-driven conformational changes of MurD visualized by paramagnetic NMR | Fuyuhiko Inagaki, Hideki Tsujishita, Hiroto Yamaguchi, Hiroyuki Kumeta, Kazumi Shimizu, Kenji Ogura, Kota Kodama, Masashi Yokochi, Tomohide Saio, Yoshihiro Kobashigawa |
26529 | Chemical Shifts: 1 set |
WHB in complex with UBCH10 | RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex | Brenda A Schulman, Christy R Grace, Edmond R Watson, Florian Weissmann, Holger Stark, Jan-Michael Peters, Jeremiah J Frye, Marcelo L Actis, Masaya Yamaguchi, Naoaki Fujii, Nicholas G Brown, Patrick Rodrigues, Prakash Dube, Renping Qiao, Ryan VanderLinden, Shein E Cho |
26528 | Chemical Shifts: 1 set |
UBCH10 in complex with WHB | RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex | Brenda A Schulman, Christy R Grace, Edmond R Watson, Florian Weissmann, Holger Stark, Jan-Michael Peters, Jeremiah J Frye, Marcelo L Actis, Masaya Yamaguchi, Naoaki Fujii, Nicholas G Brown, Patrick Rodrigues, Prakash Dube, Renping Qiao, Ryan VanderLinden, Shein E Cho |
26526 | Chemical Shifts: 1 set |
UBCH10 | RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex | Brenda A Schulman, Christy R Grace, Edmond R Watson, Florian Weissmann, Holger Stark, Jan-Michael Peters, Jeremiah J Frye, Marcelo L Actis, Masaya Yamaguchi, Naoaki Fujii, Nicholas G Brown, Patrick Rodrigues, Prakash Dube, Renping Qiao, Ryan VanderLinden, Shein E Cho |
26527 | Chemical Shifts: 1 set |
WHB | RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex | Brenda A Schulman, Christy R Grace, Edmond R Watson, Florian Weissmann, Holger Stark, Jan-Michael Peters, Jeremiah J Frye, Marcelo L Actis, Masaya Yamaguchi, Naoaki Fujii, Nicholas G Brown, Patrick Rodrigues, Prakash Dube, Renping Qiao, Ryan VanderLinden, Shein E Cho |
25224 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein | Backbone 1H, 13C, and 15N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein | Hirokazu Yagi, Koichi Kato, Maho Yagi-Utsumi, Shigeru Iida, Takumi Yamaguchi, Ying Zhang |
11528 | Chemical Shifts: 1 set |
STRUCTURE OF METALLO-DNA IN SOLUTION | The structure of metallo-DNA with consecutive T-Hg(II)-T base-pairs explains positive entropy for the metallo-base-pair formation | A Ono, C Kojima, H Yamaguchi, I Okamoto, J Kondo, J Sebera, J V Burda, S Oda, T Dairaku, T Kawamura, T Komuro, V Sychrovsky, Y Kondo, Y Tanaka |
18277 | Chemical Shifts: 1 set |
Solution structures of KmAtg10 | Structural insights into Atg10-mediated formation of the autophagy-essential Atg12-Atg5 conjugate. | Fuyuhiko Inagaki, Hayashi Yamamoto, Hiroyuki Kumeta, Masaya Yamaguchi, Nobuo N Noda, Rinji Akada, Takayuki Shima, Yoshihiro Kobashigawa, Yoshinori Ohsumi |
17680 | Chemical Shifts: 1 set |
Solution structure of Helix-RING domain in the Tyr363 phosphorylated form. | Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b. | Akira Tomitaka, Fuyuhiko Inagaki, Hiroyuki Kumeta, Masaya Yamaguchi, Nobuo N Noda, Yoshihiro Kobashigawa |
11442 | Chemical Shifts: 1 set |
Backbone 1H, 13C and 15N chemical shift assignments of Hd3a (K31A/E57A) | 14-3-3 proteins act as intracellular receptors for rice Hd3a florigen | Atsushi Nakagawa, Chihiro Shimada, Chika Nakashima, Chojiro Kojima, Hiroyuki Tsuji, Izuru Ohki, Ken-ichiro Taoka, Kokoro Hayashi, Ko Shimamoto, Kyoko Furuita, Midori Yamaguchi, Shojiro Tamaki, Tomoko Yanase, Yekti A Purwestri, Yuka Ogaki |
11435 | Chemical Shifts: 1 set |
1H, 13C, and 15N Chemical Shift Assignments for amyloid-beta-(1-40) | Transient formation of intermediate conformational states of amyloid-beta peptide revealed by heteronuclear magnetic resonance spectroscopy | Katsumi Matsuzaki, Masaru Hoshino, Takahiro Yamaguchi |
16835 | Chemical Shifts: 1 set |
The NMR structure of the autophagy-related protein Atg8 | The NMR structure of the autophagy-related protein Atg8. | Fuyuhiko Inagaki, Hiroyuki Kumeta, Hitoshi Nakatogawa, Kenji Ogura, Masahiro Watanabe, Masaya Yamaguchi, Nobuo N Noda, Wakana Adachi, Yoshinori Ohsumi, Yuko Fujioka |
15607 | Chemical Shifts: 1 set |
Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis | Structure of the putative 32 kDa myrosinase-binding protein from Arabidopsis (At3g16450.1) determined by SAIL-NMR. | Akira M Ono, David J Aceti, Hirokazu Yagi, John L Markley, Jungoo Jee, Koichi Kato, Masatsune Kainosho, Mitsuhiro Takeda, Nozomi Sugimori, Peter Guntert, Takuya Torizawa, Teppei Ikeya, Tsutomu Terauchi, Yoshiki Yamaguchi |
10062 | Chemical Shifts: 1 set |
Backbone 1H and 15N Chemical Shift Assignments for Nedd8 | Direct interactions between Nedd8 and ubiquitin E2 conjugating enzymes upregulate cullin-based E3 ligase activity | Eri Sakata, Kazuhiro Iwai, Keiji Tanaka, Koichi Kato, Noriyuki Matsuda, Tomoki Chiba, Yasuhiro Miyauchi, Yasusi Saeki, Yoshiki Yamaguchi |
6972 | Chemical Shifts: 1 set |
NMR assignment of the a' domain of thermophilic fungal protein disulfide isomerase | NMR Assignments of the b' and a' Domains of Thermophilic Fungal Protein Disulfide Isomerase | Chiho Murakami, Eiji Kurimoto, Hiroaki Sasakawa, Koichi Kato, Michiko Nakano, Osamu Asami, Takushi Harada, Tsutomu Kajino, Yoshiki Yamaguchi |
6971 | Chemical Shifts: 1 set |
NMR assignment of the b' domain of thermophilic fungal protein disulfide isomerase | NMR Assignments of the b' and a' Domains of Thermophilic Fungal Protein Disulfide Isomerase | Chiho Murakami, Eiji Kurimoto, Hiroaki Sasakawa, Koichi Kato, Michiko Nakano, Osamu Asami, Takushi Harada, Tsutomu Kajino, Yoshiki Yamaguchi |
10005 | Chemical Shifts: 1 set |
1H, 13C, and 15N Chemical Shift Assignments for ChitinaseC chitin binding domain | Identification of the Substrate Interaction Region of the Chitin-Binding Domain of Streptomyces griseus Chitinase C | Eriko Chikaishi, Hideo Akutsu, Ikegami Takahisa, Jun Watanabe, Ken-ichi Akagi, Masashi Hara, Takamasa Nonaka, Takeshi Watanabe, Tohru Yamaguchi, Yuichiro Kezuka |
6511 | Chemical Shifts: 1 set |
NMR structure of peptide SD | Structure, epitope mapping and docking simulation of a gibberellin mimic peptide recognized by an anti-gibberellin A4 antibody 4-B8(8)/E9 | H Hemmi, I Yamaguchi, K Shimizu, S Nakamura, T Murata, Y Suzuki |
6278 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for yeast Sed5p | Sly1 Binds to Golgi and ER Syntaxins via a Conserved N-Terminal Peptide Motif | Irina Dulubova, Josep Rizo, Sang-Won Min, Thomas C Sudhof, Tomohiro Yamaguchi, Xiaocheng Chen |
5903 | Chemical Shifts: 1 set |
1H,13C and 15N backbone resonance assignment of the Hyaluronan-binding domain of CD44 | Letter to the Editor: 1H, 13C and 15N backbone resonance assignments of the Hyaluronan-binding domain of CD44 | Hiroaki Terasawa, Hiroto Kawashima, Ichio Shimada, Masahiro Kajiwara, Masayoshi Sakakura, Masayuki Miyasaka, Mitsuhiro Takeda, Yoshiki Yamaguchi |
5500 | Chemical Shifts: 1 set |
Parkin binds the Rpn10 subunit of 26S proteasomes with the ubiquitin-like domain | Parkin binds the Rpn10 subunit of 26S proteasomes with the ubiquitin-like domain | Eiji Kurimoto, Eri Sakata, Hideyoshi Yokosawa, Hiroyuki Kawahara, Jun Kikuchi, Keiji Tanaka, Koichi Kato, Nobutaka Hattori, Shigeyuki Yokoyama, Yoshiki Yamaguchi, Yoshikuni Mizuno |
4945 | Chemical Shifts: 1 set |
VAM3P N-TERMINAL DOMAIN SOLUTION STRUCTURE | Vam3p Structure Reveals Conserved and Divergent Properties of Syntaxins | I Dulubova, J Rizo, T C Sudhof, T Yamaguchi, Y Wang |