Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
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Entry ID | Data summary | Entry Title | Citation Title | Authors |
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34885 | Chemical Shifts: 1 set |
Solution structure of SMN-CX bound to the RNA helix formed upon SMN2 exon7 5'-splice site recognition | The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design | A Ecoutin, A Wolter, E Morvan, F H Allain, F Malard, J Marquevielle, S Campagne, S Rudisser |
34879 | Chemical Shifts: 1 set |
Solution structure of branaplam bound to the RNA duplex formed upon 5'-splice site recognition | The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design | A Ecoutin, A Wolter, E Morvan, F H Allain, F Malard, J Marquevielle, S Campagne, S Ruedisser |
34878 | Chemical Shifts: 1 set |
Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition | The diversity of splicing modifier acting on A-1 bulged 5'-splice site reveals rules for rational drug design. | A Ecoutin, A Wolter, E Morvan, F H Allain, F Malard, J Marquevielle, S Campagne, S Ruedisser |
34766 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
NMR solution structure of the N-terminal RRM and flanking linker regions of Polypyrimidine tract binding protein 1 using the CYANA CONSENSUS method. | N-terminal domain of Polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition | C Maris, F Damberger, F H Allain, G Dorn, I Beusch, J Sponer, M Krepl, S Ravindranathan |
34675 | Chemical Shifts: 1 set |
The solution structure of hsDND1 RRM12 bound to CUUAUUUG RNA | The solution structure of Dead End bound to AU-rich RNA reveals an unusual mode of tandem RRM-RNA recognition required for mRNA regulation | C Ciaudo, C von Schroetter, F E Loughlin, F HT Allain, H Wischnewski, J Hall, M M Duszczyk, R Arora, T Kazeeva, U Pradere |
34643 | Chemical Shifts: 1 set |
Solution structure of the human SF3A1 ubiquitin-like domain | Sequence-specific RNA recognition by an RGG motif connects U1 and U2 snRNP for spliceosome assembly | A Leitner, C P Sarnowski, F Allain, J Wong, K Sabath, S Campagne, S Jonas, S Sharma, T de Vries, W Martelly |
34291 | Chemical Shifts: 1 set |
NMR structure of the DNA-bound helix bundle domain from the functional pRN1 primase | A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template | B H Meier, F H-T Allain, G Lipps, J Boudet, J C Devillier, L Salmon, T Wiegand |
34290 | Chemical Shifts: 1 set |
Hybrid structure of the pRN1 helix bundle domain in complex with DNA and 2 ATP molecules | A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template | B H Meier, F H-T Allain, G Lipps, J Boudet, J C Devillier, L Salmon, T Wiegand |
34287 | Chemical Shifts: 1 set |
NMR structure of the free helix bundle domain from the functional pRN1 primase | A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template | B H Meier, F H-T Allain, G Lipps, J Boudet, J C Devillier, L Salmon, T Wiegand |
34259 | Chemical Shifts: 2 sets Spectral_peak_list: 6 sets |
Solution structure of FUS-RRM bound to stem-loop RNA | The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity. | A Clery, C Von Schroetter, E M Hock, F E Loughlin, F H Allain, M Colombo, M D Ruepp, M Polymenidou, O Muhlemann, P J Lukavsky, P Pauli, S Reber, T Kazeeva |
34258 | Chemical Shifts: 2 sets Spectral_peak_list: 3 sets |
Solution structure of FUS-ZnF bound to UGGUG | The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity. | A Clery, C Von Schroetter, E M Hock, F E Loughlin, F H Allain, M Colombo, M D Ruepp, M Polymenidou, O Muhlemann, P J Lukavsky, P Pauli, S Reber, T Kazeeva |
34248 | Chemical Shifts: 2 sets |
NMR Solution Structure of Yeast TSR2(1-152) in Complex with S26A(100-119) | Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2. | A Leitner, C Pena, E Michel, F F Damberger, F H Allain, M Oplova, R Aebersold, S Schutz, V G Panse |
34247 | Chemical Shifts: 1 set |
NMR Solution Structure of yeast TSR2(1-152) | Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2 | A Leitner, C Pena, E Michel, F F Damberger, F H-T Allain, M Oplova, R Aebersold, S Schuetz, V G Panse |
34172 | Chemical Shifts: 1 set |
NMR structure of the complex formed by an engineered region 2 of sigmaE in complex with GTAAAA | Engineered promoter selectivity of an ECF sigma factor | F H Allain, G Capitani, J A Vorholt, M E Marsh, S Campagne |
27164 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for hnRNP A1 RRM1 | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | F Damberger, F HT Allain, J Sponer, M F Krepl, N Diarra dit Konte, N Ripin, O F Duss |
27163 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for hnRNP A1 RRM1 | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | F F Damberger, F HT Allain, J Sponer, M Krepl, N Diarra dit Konte, N Ripin, O F Duss |
27156 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 H429A mutant | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27157 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 F455A mutant | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27153 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 F455A mutant in complex with (5'-R(*UP*UP*UP*AP*A)-3') | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27152 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 H429A mutant in complex with (5'-R(*UP*UP*UP*AP*A)-3') | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27154 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 wild type in complex with (5'-R(*UP*GP*UP*GP*U)-3') | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27155 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 Y428A mutant | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27142 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 Y428A mutant in complex with (5'-R(*UP*UP*UP*AP*A)-3') | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
27140 | Coupling Constants: 1 set |
3Jcgn & 3Jcgc' scalar couplings for CUG-BP2 RRM3 wild type | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | Frederic H-T H Allain, Fred F Damberger, Jiri Sponer, Miroslav Krepl, Nana Diarra Dit Konte, Nina Ripin, Olivier Duss |
34104 | Chemical Shifts: 1 set |
Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex A) | Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains | A Holla, A L Malinowska, B Schuler, C Maris, F Aeschimann, G Jeschke, G Masliah, H TF Allain, J Mabille, J Weiler, L BS Koenig, M Yulikov, N Meisner-Kober |
34103 | Chemical Shifts: 1 set |
Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex B) | Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains | A Holla, A L Malinowska, B Schuler, C Maris, F Aeschimann, G Jeschke, G Masliah, H TF Allain, J Mabille, J Weiler, L BS Koenig, M Yulikov, N Meisner-Kober |
34057 | Chemical Shifts: 2 sets Coupling Constants: 2 sets |
Solution structure of CUG-BP2 RRM3 in complex with 5'-UUUAA-3' RNA | Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination | F F Damberger, F H Allain, J Sponer, M Krepl, N Diarra dit Konte, N Ripin, O F Duss |
25652 | Chemical Shifts: 2 sets Residual Dipolar Couplings: 1 set |
Structure of PTB RRM1(41-163) bound to an RNA stemloop containing a structured loop derived from viral internal ribosomal entry site RNA | C-terminal helix folding upon pyrimidine-rich hairpin binding to PTB RRM1. Implications for PTB function in Encephalomyocarditis virus IRES activity. | Christophe Maris, Frederic HT Allain, Fred F Damberger, Sandrine F Jayne, Sapna Ravindranathan |
25469 | Chemical Shifts: 1 set |
Solution structure of hnRNP C RRM in complex with 5'-UUUUC-3' RNA | Structural and mechanistic insights into poly(uridine) tract recognition by the hnRNP C RNA recognition motif. | Christophe Maris, Frederic H-T Allain, Fred F Damberger, Jonathan Hall, Zuzana Cienikova |
25436 | Chemical Shifts: 1 set |
Solution structure of hnRNP C RRM in complex with the 5'-AUUUUUC-3' RNA | Structural and mechanistic insights into poly(uridine) tract recognition by the hnRNP C RNA recognition motif. | Christophe Maris, Frederic H-T Allain, Fred F Damberger, Jonathan Hall, Zuzana Cienikova |
19502 | Chemical Shifts: 1 set |
Protein structure | A bimodular nuclear localization signal assembled via an extended double-stranded RNA-binding domain acts as an RNA-sensing signal for transportin 1. | Frederic H-T Allain, Michael F Jantsch, Pierre Barraud, Silpi Banerjee, Weaam I Mohamed |
19290 | Chemical Shifts: 1 set |
NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA | Molecular basis of UG-rich RNA recognition by the human splicing factor TDP-43. | Cristiana Stuani, Dalia Daujotyte, Emanuele Buratti, Francisco E Baralle, Frederic H-T Allain, Fred F Damberger, James R Tollervey, Jernej Ule, Peter J Lukavsky |
17784 | Chemical Shifts: 1 set |
NMR structure of the PhyRSL-NepR complex from Sphingomonas sp. Fr1 | Structural basis for sigma factor mimicry in the general stress response of Alphaproteobacteria. | Andreas Kaczmarczyk, Anne Francez-Charlot, Frederic H-T Allain, Fred F Damberger, Julia A Vorholt, Sebastien Campagne |
17263 | Chemical Shifts: 1 set Heteronuclear NOE Values: 1 set H Exchange Protection Factors: 1 set H Exchange Rates: 1 set |
Solution structure of the small archaeal modifier protein 1 (SAMP1) from Methanosarcina acetivorans. | Solution structure and activation mechanism of ubiquitin-like small archaeal modifier proteins. | Eilika Weber-Ban, Frederic H-T Allain, Fred F Damberger, Markus Sutter, Namit Ranjan |
16192 | Chemical Shifts: 1 set |
NMR structure of the first qRRM of hnRNP F in complex with AGGGAU G-tract RNA | Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. | Benoit Chabot, Cyril Dominguez, Frederic H-T Allain, Jean-Francois Fisette |
16194 | Chemical Shifts: 1 set |
Structure of the third qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA | Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. | Benoit Chabot, Cyril Dominguez, Frederic HT Allain, Jean-Francois Fisette |
16193 | Chemical Shifts: 1 set |
Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA | Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. | Benoit Chabot, Cyril Dominguez, Frederic HT Allain, Jean-Francois Fisette |
7257 | Chemical Shifts: 1 set |
Solution structure of the RRM domain of SR rich factor 9G8 | Molecular basis of RNA recognition and TAP binding by the SR proteins SRp20 and 9G8 | A M Tintaru, A P Golovanov, F HT Allain, G M Hautbergue, J Stevenin, L Skrisovska, L Y Lian, S A Wilson, Y Hargous |
6895 | Chemical Shifts: 2 sets |
NMR Structure of the RNA Binding Domain of Human Fox-1 in Complex with UGCAUGU | Molecular basis of RNA recognition by the human alternative splicing factor Fox-1. | D L Black, F H-T Allain, J G Underwood, L Reymond, R Fasan, S D Auweter, S Pitsch |
6745 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N chemical shift assignments of human HnRNP F | Resonance Assignments of the Two N-terminal RNA Recognition Motifs (RRM) of the Human Heterogeneous Nuclear Ribonucleoprotein F (HnRNP F) | Cyril Dominguez, Frederic H-T Allain |
6485 | Chemical Shifts: 1 set |
A novel RNA pentaloop fold involved in targeting ADAR2 | A novel RNA pentaloop fold involved in targeting ADAR2 | F H Allain, R Stefl |
4869 | Chemical Shifts: 1 set |
HMG PROTEIN NHP6A FROM SACCHAROMYCES CEREVISIAE | Solution Structure of the Hmg Protein Nhp6A and its Interaction with DNA Reveals the Structural Determinants for Non-sequence-specific Binding | F HT Allain, J Feigon, J M Masse, P Schultze, R C Johnson, T Dieckmann, Y M Yen |
4867 | Chemical Shifts: 2 sets |
SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA | Molecular Basis of Sequence-specific Recognition of Pre-ribosomal RNA by Nucleolin | F HT Allain, J Feigon, P Bouvet, T Dieckmann |
4863 | Chemical Shifts: 1 set |
SOLUTION STRUCTURE OF NUCLEOLIN RBD2 | Solution Strcuture of the two N-terminal RNA-binding Domains of Nucleolin and NMR Study of the Interaction with its RNA Target | D E Gilbert, F HT Allain, J Feigon, P Bouvet |
4858 | Chemical Shifts: 1 set |
SOLUTION STRUCTURE OF NUCLEOLIN RBD1 | Solution Strcuture of the two N-terminal RNA-binding Domains of Nucleolin and NMR Study of the Interaction with its RNA Target | D E Gilbert, F HT Allain, J Feigon, P Bouvet |